RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 GSPT2Q8IYD1 628 aaKnown RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 RPGRQ92834 1020 aaKnown RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
CPNE8-203ENST00000538596 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
CPNE8-203ENST00000538596 KRT86O43790 486 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 UBE2SQ16763 222 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
CPNE8-203ENST00000538596 CNNM4Q6P4Q7 775 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 SV2BQ7L1I2 683 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 ZSCAN29Q8IWY8 852 aaPredicted RBP13.33□□□□□ -0.28
CPNE8-203ENST00000538596 CCDC102AQ96A19 550 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 DRC1Q96MC2 740 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 MAGEF1Q9HAY2 307 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 USP14P54578 494 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 ECM1Q16610 540 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 TAF3Q5VWG9 929 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 CENPPQ6IPU0 288 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 JADE2Q9NQC1 790 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 POLLQ9UGP5 575 aa13.33□□□□□ -0.28
CPNE8-203ENST00000538596 EIF3CLB5ME19 914 aaKnown RBP13.32□□□□□ -0.28
CPNE8-203ENST00000538596 AKR1B1P15121 316 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 MRPS25P82663 173 aaKnown RBP13.32□□□□□ -0.28
CPNE8-203ENST00000538596 AMPD3Q01432 767 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 LARP4BQ92615 738 aaKnown RBP13.32□□□□□ -0.28
CPNE8-203ENST00000538596 CCDC42Q96M95 316 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 EIF3CQ99613 913 aaKnown RBP13.32□□□□□ -0.28
CPNE8-203ENST00000538596 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 RIOX1Q9H6W3 641 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 MMRN2Q9H8L6 949 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 MLXIPQ9HAP2 919 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 ARHGAP20Q9P2F6 1191 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 MYH10P35580 1976 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 IPO7O95373 1038 aaKnown RBP13.32□□□□□ -0.28
CPNE8-203ENST00000538596 TNNI2P48788 182 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 CCDC96Q2M329 555 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 FKBP15Q5T1M5 1219 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 ERGIC2Q96RQ1 377 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 NDST4Q9H3R1 872 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 GGA1Q9UJY5 639 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
CPNE8-203ENST00000538596 MYBL2P10244 700 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 C2orf54Q08AI8 447 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
CPNE8-203ENST00000538596 TXLNBQ8N3L3 684 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 CDK5RAP3Q96JB5 506 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 PSMB7Q99436 277 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 SIK3Q9Y2K2 1263 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
CPNE8-203ENST00000538596 IL1R1P14778 569 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 SLC16A2P36021 539 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 ADCY7P51828 1080 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 GPS2Q13227 327 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 LRRC4BQ9NT99 713 aa13.31□□□□□ -0.28
CPNE8-203ENST00000538596 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 RIMBP2O15034 1052 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 TNNT3P45378 269 aaPredicted RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 NT5C2P49902 561 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 TUBB4BP68371 445 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 GTF2IP78347 998 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 KIF5AQ12840 1032 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 UNC13DQ70J99 1090 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 SEPT12Q8IYM1 358 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 DDX12PQ92771 950 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 EXOC4Q96A65 974 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 MXD3Q9BW11 206 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 DDX4Q9NQI0 724 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 SMARCAL1Q9NZC9 954 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 LRRC53A6NM62 1247 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 EIF3JO75822 258 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 MOCS3O95396 460 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 EIF4A3P38919 411 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 VAV2P52735 878 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 ZSCAN26Q16670 478 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 RRAGAQ7L523 313 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 RIN2Q8WYP3 895 aaPredicted RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 SECISBP2LQ93073 1101 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 PURBQ96QR8 312 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 IFIH1Q9BYX4 1025 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 KANSL2Q9H9L4 492 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 TBC1D7Q9P0N9 293 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 CXCR5P32302 372 aa13.3□□□□□ -0.28
CPNE8-203ENST00000538596 EZH2Q15910 746 aaKnown RBP13.3□□□□□ -0.28
CPNE8-203ENST00000538596 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms