RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 PPFIBP2Q8ND30 876 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 MCUQ8NE86 351 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 FAM49AQ9H0Q0 323 aaPredicted RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 PRDM5Q9NQX1 630 aaPredicted RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 FIS1Q9Y3D6 152 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 PTPRTO14522 1441 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 LRRC43Q8N309 656 aa12.24□□□□□ -0.45
LINC00346-201ENST00000538077 PUS7LQ9H0K6 701 aaKnown RBP12.24□□□□□ -0.45
LINC00346-201ENST00000538077 A0A087WWV3 80 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 GOLGA8IPA6NC78 632 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 GOLGA8JA6NMD2 632 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CLGNO14967 610 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 PRPSAP1Q14558 356 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 TBCKQ8TEA7 893 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 SPATA17Q96L03 361 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 DDX41Q9UJV9 622 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ANAPC5Q9UJX4 755 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 NDUFAB1O14561 156 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 IL1RL1Q01638 556 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 BFSP1Q12934 665 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ADALQ6DHV7 355 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 SEMA3EO15041 775 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 BMP3P12645 472 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 PAK2Q13177 524 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ADCK5Q3MIX3 580 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 TTC19Q6DKK2 380 aaPredicted RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CIAPIN1Q6FI81 312 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CNOT6LQ96LI5 555 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 NLRP4Q96MN2 994 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 EFCC1Q9HA90 598 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 DBNLQ9UJU6 430 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 FAM135BQ49AJ0 1406 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 MMP10P09238 476 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 EIF2AK2P19525 551 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 GBP1P32455 592 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 MYLK4Q86YV6 388 aaPredicted RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ATP2A3Q93084 1043 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ERO1AQ96HE7 468 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 SLC38A10Q9HBR0 1119 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 PLCB1Q9NQ66 1216 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 NLRP1Q9C000 1473 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CTNNA1P35221 906 aaKnown RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ANKRD13CQ8N6S4 541 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CCNYQ8ND76 341 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 SH3RF3Q8TEJ3 882 aaPredicted RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 PIGBQ92521 554 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 FAM149B1Q96BN6 582 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF277Q9NRM2 450 aaPredicted RBP12.23□□□□□ -0.45
LINC00346-201ENST00000538077 IMPACTQ9P2X3 320 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 PCDHA7Q9UN72 937 aa12.23□□□□□ -0.45
LINC00346-201ENST00000538077 CDC25AP30304 524 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 NSFP46459 744 aaKnown RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 ABCC4O15439 1325 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 N4BP1O75113 896 aaKnown RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 SASH1O94885 1247 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 KRT71Q3SY84 523 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 PPP4R1Q8TF05 950 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 NUF2Q9BZD4 464 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 PPP1R12CQ9BZL4 782 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 FANCLQ9NW38 375 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 FAM196BA6NMK8 535 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 PKP1Q13835 747 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 GOLGA5Q8TBA6 731 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 MAIP1Q8WWC4 291 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 ALKBH8Q96BT7 664 aaKnown RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 CCDC68Q9H2F9 335 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 TYW5A2RUC4 315 aaKnown RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 WDR46O15213 610 aaKnown RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 S100BP04271 92 aaPredicted RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 PCK1P35558 622 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 MFAP3P55082 362 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 CCDC84Q86UT8 332 aaPredicted RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 SLC7A3Q8WY07 619 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 ATF2P15336 505 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 KCNA4P22459 653 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 CLCN1P35523 988 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 CDC37Q16543 378 aaPredicted RBP12.22□□□□□ -0.45
LINC00346-201ENST00000538077 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 SSH3Q8TE77 659 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 RAB17Q9H0T7 212 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 KCNG1Q9UIX4 513 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF148Q9UQR1 794 aa12.22□□□□□ -0.45
LINC00346-201ENST00000538077 PPP1R12AO14974 1030 aaPredicted RBP12.21□□□□□ -0.45
LINC00346-201ENST00000538077 STX2P32856 288 aa12.21□□□□□ -0.45
LINC00346-201ENST00000538077 PHBP35232 272 aa12.21□□□□□ -0.45
LINC00346-201ENST00000538077 IL6STP40189 918 aaPredicted RBP12.21□□□□□ -0.45
LINC00346-201ENST00000538077 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
LINC00346-201ENST00000538077 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.45
LINC00346-201ENST00000538077 ZNF668Q96K58 619 aaPredicted RBP12.21□□□□□ -0.45
LINC00346-201ENST00000538077 KIAA1468Q9P260 1216 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms