RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 MYH7BA7E2Y1 1941 aa17.35■□□□□ 0.37
LRRK1-211ENST00000538064 OPLAHO14841 1288 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 PPP1R11O60927 126 aaPredicted RBP17.34■□□□□ 0.37
LRRK1-211ENST00000538064 COL6A3P12111 3177 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 SMAD3P84022 425 aaKnown RBP17.34■□□□□ 0.37
LRRK1-211ENST00000538064 PURAQ00577 322 aaKnown RBP17.34■□□□□ 0.37
LRRK1-211ENST00000538064 TROAPQ12815 778 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.37
LRRK1-211ENST00000538064 TTLL4Q14679 1199 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 SLC35G1Q2M3R5 365 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 IWS1Q96ST2 819 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 RMDN3Q96TC7 470 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
LRRK1-211ENST00000538064 SENP2Q9HC62 589 aa17.34■□□□□ 0.37
LRRK1-211ENST00000538064 HSD17B4P51659 736 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 PSMC6P62333 389 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 BRDTQ58F21 947 aaPredicted RBP17.33■□□□□ 0.36
LRRK1-211ENST00000538064 TMEM67Q5HYA8 995 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 CATIPQ7Z7H3 387 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 TAAR1Q96RJ0 339 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 PPP1R12CQ9BZL4 782 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 RIOX1Q9H6W3 641 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 STXBP5LQ9Y2K9 1186 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 GBF1Q92538 1859 aa17.33■□□□□ 0.36
LRRK1-211ENST00000538064 A6NJR5 290 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 ARIH2O95376 493 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 CFBP00751 764 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 MYL3P08590 195 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 TXNP10599 105 aaKnown RBP17.32■□□□□ 0.36
LRRK1-211ENST00000538064 TRAF1Q13077 416 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 BMP2KLQ5H9B9 411 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 ZNF697Q5TEC3 545 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 CCDC62Q6P9F0 684 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 TMEM199Q8N511 208 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 MTG1Q9BT17 334 aaPredicted RBP17.32■□□□□ 0.36
LRRK1-211ENST00000538064 MTA3Q9BTC8 594 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 HIPK3Q9H422 1215 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 PXMP2Q9NR77 195 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
LRRK1-211ENST00000538064 PCDHA1Q9Y5I3 950 aa17.32■□□□□ 0.36
LRRK1-211ENST00000538064 CYTH3O43739 400 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 B4GALT4O60513 344 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 KPNA6O60684 536 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 DDAH1O94760 285 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 EIF2AK2P19525 551 aaKnown RBP17.31■□□□□ 0.36
LRRK1-211ENST00000538064 STXBP2Q15833 593 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 ARHGEF16Q5VV41 709 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 PSRC1Q6PGN9 363 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-211ENST00000538064 HOMER1Q86YM7 354 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 SAMD3Q8N6K7 520 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 COPS5Q92905 334 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 PIGSQ96S52 555 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.31■□□□□ 0.36
LRRK1-211ENST00000538064 NOC4LQ9BVI4 516 aaKnown RBP17.31■□□□□ 0.36
LRRK1-211ENST00000538064 ALDH8A1Q9H2A2 487 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-211ENST00000538064 LY9Q9HBG7 655 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
LRRK1-211ENST00000538064 CSF2RAP15509 400 aa17.3■□□□□ 0.36
LRRK1-211ENST00000538064 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
LRRK1-211ENST00000538064 GUCD1Q96NT3 240 aa17.3■□□□□ 0.36
LRRK1-211ENST00000538064 TRPV6Q9H1D0 765 aa17.3■□□□□ 0.36
LRRK1-211ENST00000538064 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-211ENST00000538064 UMODL1Q5DID0 1318 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 TMEM265A0A087WTH1 108 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 PNMA6FA0A0J9YX94 578 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 SH2B2O14492 632 aaPredicted RBP17.29■□□□□ 0.36
LRRK1-211ENST00000538064 SLC27A2O14975 620 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 PRC1O43663 620 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 GH1P01241 217 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 NR3C2P08235 984 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 MMP3P08254 477 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 CYP2C18P33260 490 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 ARHGAP1Q07960 439 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 TMEM240Q5SV17 173 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 SEPT14Q6ZU15 432 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 C16orf59Q7L2K0 433 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 IL23AQ9NPF7 189 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 CDH23Q9H251 3354 aa17.29■□□□□ 0.36
LRRK1-211ENST00000538064 EIF3JO75822 258 aaKnown RBP17.28■□□□□ 0.36
LRRK1-211ENST00000538064 SUPT20HL2P0C7V6 817 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 KIF5BP33176 963 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 MCM5P33992 734 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 RASIP1Q5U651 963 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 CREB3L3Q68CJ9 461 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 NFRKBQ6P4R8 1299 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 CTCFLQ8NI51 663 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-211ENST00000538064 EMID1Q96A84 441 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-211ENST00000538064 TMEM87BQ96K49 555 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 PDCD2LQ9BRP1 358 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 WNT8AQ9H1J5 351 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 ANO2Q9NQ90 1003 aa17.28■□□□□ 0.36
LRRK1-211ENST00000538064 TRMT13Q9NUP7 481 aaKnown RBP17.28■□□□□ 0.36
LRRK1-211ENST00000538064 FRMPD4Q14CM0 1322 aa17.27■□□□□ 0.36
LRRK1-211ENST00000538064 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms