RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 MRS2Q9HD23 443 aa6.62□□□□□ -1.35
SNHG1-207ENST00000537965 PICK1Q9NRD5 415 aa6.62□□□□□ -1.35
SNHG1-207ENST00000537965 ABI2Q9NYB9 513 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-207ENST00000537965 CPA4Q9UI42 421 aa6.62□□□□□ -1.35
SNHG1-207ENST00000537965 SLC45A1Q9Y2W3 748 aa6.62□□□□□ -1.35
SNHG1-207ENST00000537965 ATAD5Q96QE3 1844 aa6.62□□□□□ -1.35
SNHG1-207ENST00000537965 PTPRCP08575 1304 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 ALPK3Q96L96 1907 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 FAM13AO94988 1023 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 SGPL1O95470 568 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 PDGFAP04085 211 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 LDHBP07195 334 aaKnown RBP6.61□□□□□ -1.35
SNHG1-207ENST00000537965 NBPF7P0C2Y1 421 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-207ENST00000537965 DNM1Q05193 864 aaKnown RBP6.61□□□□□ -1.35
SNHG1-207ENST00000537965 TCP10Q12799 353 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 HYAL2Q12891 473 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 LRRC24Q50LG9 513 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 WFDC8Q8IUA0 241 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 FMR1NBQ8N0W7 255 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-207ENST00000537965 VGLL2Q8N8G2 317 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 LPIN2Q92539 896 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 COA7Q96BR5 231 aa6.61□□□□□ -1.35
SNHG1-207ENST00000537965 BICC1Q9H694 974 aaKnown RBP6.61□□□□□ -1.35
SNHG1-207ENST00000537965 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 EYA2O00167 538 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ANP32CO43423 234 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ADCY3O60266 1144 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ENTPD3O75355 529 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 FARP2O94887 1054 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 KIF4AO95239 1232 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 TFRCP02786 760 aaKnown RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 PCSK2P16519 638 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 FGFR2P21802 821 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 GATA4P43694 442 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 SPTY2D1Q68D10 685 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 CDC42EP5Q6NZY7 148 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 UBE2Q1Q7Z7E8 422 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ZSCAN29Q8IWY8 852 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 SCYL3Q8IZE3 742 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 SLC17A8Q8NDX2 589 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 SMCR8Q8TEV9 937 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 U2AF1L4Q8WU68 220 aaKnown RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 SHISA4Q96DD7 197 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 KAZALD1Q96I82 304 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 USP40Q9NVE5 1235 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 TMEM63CQ9P1W3 806 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 DENND2AQ9ULE3 1009 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 LRRFIP2Q9Y608 721 aaKnown RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 RANBP2P49792 3224 aaKnown RBP6.6□□□□□ -1.35
SNHG1-207ENST00000537965 COL6A3P12111 3177 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 CDK5RAP2Q96SN8 1893 aa6.6□□□□□ -1.35
SNHG1-207ENST00000537965 ADGRA2Q96PE1 1338 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 SALL1Q9NSC2 1324 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 A0A0G2JLL6 359 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 C9orf172C9J069 976 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 TNPO2O14787 897 aaKnown RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 CTNND1O60716 968 aaKnown RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 MAP4K4O95819 1239 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 SELPP16109 830 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 PRKCZQ05513 592 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 PDE4CQ08493 712 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 PABPC4Q13310 644 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 SUZ12Q15022 739 aaKnown RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 CCDC184Q52MB2 194 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 GADL1Q6ZQY3 521 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 NECAB2Q7Z6G3 386 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 PRRT2Q7Z6L0 340 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 FBXO11Q86XK2 927 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 RETREG2Q8NC44 543 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 LENG1Q96BZ8 264 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-207ENST00000537965 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 IDI2Q9BXS1 227 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 DAGLAQ9Y4D2 1042 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 ZHX2Q9Y6X8 837 aa6.59□□□□□ -1.35
SNHG1-207ENST00000537965 DLL1O00548 723 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 CIAO1O76071 339 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 ABL1P00519 1130 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 CYP2E1P05181 493 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-207ENST00000537965 LDHCP07864 332 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 PTPRAP18433 802 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 CTGFP29279 349 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 BMP8BP34820 402 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 GCLCP48506 637 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-207ENST00000537965 FLT3LGP49771 235 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 MOGSQ13724 837 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 ATP2B3Q16720 1220 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 C8orf34Q49A92 452 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 DZIP1Q86YF9 867 aaKnown RBP6.58□□□□□ -1.36
SNHG1-207ENST00000537965 CACTIN-AS1Q8N1I8 211 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 ANKRD44Q8N8A2 993 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 TTC16Q8NEE8 873 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 USP44Q9H0E7 712 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 PRO3102Q9H379 93 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 CNTN3Q9P232 1028 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 EGFL7Q9UHF1 273 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 AFG3L2Q9Y4W6 797 aa6.58□□□□□ -1.36
SNHG1-207ENST00000537965 ZNFX1Q9P2E3 1918 aaKnown RBP6.58□□□□□ -1.36
SNHG1-207ENST00000537965 SZT2Q5T011 3432 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms