RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 SP8Q8IXZ3 490 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 PLEKHO2Q8TD55 490 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 BTN2A2Q8WVV5 523 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 TSPAN17Q96FV3 270 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 SEC16BQ96JE7 1060 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 BTG4Q9NY30 223 aa6.95□□□□□ -1.3
SRGAP1-203ENST00000537585 C8BP07358 591 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 SYN1P17600 705 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 TARBP2Q15633 366 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 SF1Q15637 639 aaKnown RBP6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 B3GNT8Q7Z7M8 397 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 SAPCD2Q86UD0 394 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 TRIM59Q8IWR1 403 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 FAM26EQ8N5C1 309 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 BVESQ8NE79 360 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 FRS2Q8WU20 508 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 PPP1R14AQ96A00 147 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 RNF38Q9H0F5 515 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 CCSER2Q9H7U1 834 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 MARCH2Q9P0N8 246 aa6.94□□□□□ -1.3
SRGAP1-203ENST00000537585 NCAM1P13591 858 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 FPR2P25090 351 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 RTP5Q14D33 572 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 PRSS53Q2L4Q9 553 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 NETO2Q8NC67 525 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 NPLOC4Q8TAT6 608 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 CXorf38Q8TB03 319 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 DDX11Q96FC9 970 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 FAN1Q9Y2M0 1017 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 DUSP10Q9Y6W6 482 aa6.93□□□□□ -1.3
SRGAP1-203ENST00000537585 NFKB2Q00653 900 aa6.92□□□□□ -1.3
SRGAP1-203ENST00000537585 SMAD4Q13485 552 aaKnown RBP6.92□□□□□ -1.3
SRGAP1-203ENST00000537585 NT5DC1Q5TFE4 455 aa6.92□□□□□ -1.3
SRGAP1-203ENST00000537585 NLRP10Q86W26 655 aa6.92□□□□□ -1.3
SRGAP1-203ENST00000537585 USP33Q8TEY7 942 aa6.92□□□□□ -1.3
SRGAP1-203ENST00000537585 SGSM2O43147 1006 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 NPHS1O60500 1241 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 ETFBP38117 255 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 KCNC1P48547 511 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 LARP1BQ659C4 914 aaKnown RBP6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 STK32CQ86UX6 486 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 FERMT3Q86UX7 667 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 CABP7Q86V35 215 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 ZNF227Q86WZ6 799 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 APBA2Q99767 749 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 NKX2-4Q9H2Z4 354 aa6.91□□□□□ -1.3
SRGAP1-203ENST00000537585 SH3D21A4FU49 640 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 ITGAVP06756 1048 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 DENND5AQ6IQ26 1287 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 FRMD5Q7Z6J6 570 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 HOMEZQ8IX15 550 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 PEX11GQ96HA9 241 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 TEPSINQ96N21 525 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 GORASP1Q9BQQ3 440 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 BDH2Q9BUT1 245 aa6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.3
SRGAP1-203ENST00000537585 LCP1P13796 627 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 CAP1Q01518 475 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 CACNB2Q08289 660 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 FAM178BQ8IXR5 827 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 KREMEN2Q8NCW0 462 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 MMP19Q99542 508 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 STRIP2Q9ULQ0 834 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
SRGAP1-203ENST00000537585 C22orf46C9J442 243 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 ECI1P42126 302 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 PRRT2Q7Z6L0 340 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 CARFQ8N187 725 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 NLGN1Q8N2Q7 840 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 CPA5Q8WXQ8 436 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 ZBTB8AQ96BR9 441 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 CYP26B1Q9NR63 512 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 ACTR10Q9NZ32 417 aa6.88□□□□□ -1.31
SRGAP1-203ENST00000537585 SUSD5O60279 629 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 NOBOXO60393 691 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 ERCC5P28715 1186 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 BCL6P41182 706 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 STAT5AP42229 794 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 GRIA2P42262 883 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 NCAPHQ15003 741 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 SV2CQ496J9 727 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 CAPN10Q9HC96 672 aa6.87□□□□□ -1.31
SRGAP1-203ENST00000537585 NOP56O00567 594 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 SNRPB2P08579 225 aaKnown RBP6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 CELA3BP08861 270 aa6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 GGNQ86UU5 652 aa6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 ZNF761Q86XN6 746 aaPredicted RBP6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 NUDT5Q9UKK9 219 aa6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 PALD1Q9ULE6 856 aa6.86□□□□□ -1.31
SRGAP1-203ENST00000537585 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 FGRP09769 529 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 CNR2P34972 360 aa6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 ZNF143P52747 638 aaPredicted RBP6.85□□□□□ -1.31
SRGAP1-203ENST00000537585 SLC9A5Q14940 896 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms