RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 PRPF40AO75400 957 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 EIF2AK2P19525 551 aaKnown RBP17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 MARCKSP29966 332 aaPredicted RBP17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 TRAPPC10P48553 1259 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 NFKBIBQ15653 356 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 SHCBP1Q8NEM2 672 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 TMEM60Q9H2L4 133 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 FBXO40Q9UH90 709 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 CFAP45Q9UL16 551 aa17.83■□□□□ 0.44
SFSWAP-206ENST00000537582 RPTORQ8N122 1335 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 MYH7BA7E2Y1 1941 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 CA12O43570 354 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 GADD45BO75293 160 aaPredicted RBP17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 STK38Q15208 465 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 ATL3Q6DD88 541 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 CYP2W1Q8TAV3 490 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 MMP19Q99542 508 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 MROH8Q9H579 483 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
SFSWAP-206ENST00000537582 TBC1D8O95759 1140 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 CCNA1P78396 465 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 GRIN1Q05586 938 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 SLC39A14Q15043 492 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 POTEDQ86YR6 584 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 C4orf32Q8N8J7 132 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 PXMP2Q9NR77 195 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 FRMPD4Q14CM0 1322 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 PCNTO95613 3336 aa17.81■□□□□ 0.44
SFSWAP-206ENST00000537582 SOWAHBA6NEL2 793 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 FAM86B1E9PN63 330 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 SPTLC2O15270 562 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 YEATS4O95619 227 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 FAM86B2P0C5J1 330 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 COPB2P35606 906 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 C1QTNF8P60827 252 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 PTGDRQ13258 359 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 MCTP2Q6DN12 878 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 TMEM87AQ8NBN3 555 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 GJA10Q969M2 543 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 FGD4Q96M96 766 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 SCAND2PQ9GZW5 306 aaPredicted RBP17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 LMBRD1Q9NUN5 540 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 MAP3K20Q9NYL2 800 aaKnown RBP17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 PFASO15067 1338 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 THSD7BQ9C0I4 1608 aa17.8■□□□□ 0.44
SFSWAP-206ENST00000537582 POTEB2H3BUK9 544 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 FCER1AP12319 257 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 HSPA6P17066 643 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 CTGFP29279 349 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 KCTD2Q14681 263 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 PGM5Q15124 567 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 ARHGEF16Q5VV41 709 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 TEX2Q8IWB9 1127 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 SAMD3Q8N6K7 520 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 FAM133AQ8N9E0 248 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 PDCD2LQ9BRP1 358 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 DNAJC25-GNG10A0A024R161 153 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 TRPA1O75762 1119 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 CYP3A4P08684 503 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 MAP2K2P36507 400 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 USP11P51784 963 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 MRPS9P82933 396 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 IL17AQ16552 155 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 CCAR1Q8IX12 1150 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 LENG9Q96B70 501 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 CLIC6Q96NY7 704 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 RNF186Q9NXI6 227 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 DDX25Q9UHL0 483 aaKnown RBP17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
SFSWAP-206ENST00000537582 IGLV3-22A0A075B6J6 115 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 NEMFO60524 1076 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 COBLO75128 1261 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 ALDH1A1P00352 501 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 MYCLP12524 364 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 ADORA2AP29274 412 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 ME1P48163 572 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 CAP1Q01518 475 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 PRR16Q569H4 304 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 PPP4R3AQ6IN85 833 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 FBXO2Q9UK22 296 aaPredicted RBP17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 ZSWIM8A7E2V4 1837 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 PLXNB2O15031 1838 aa17.78■□□□□ 0.44
SFSWAP-206ENST00000537582 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 ITGB5P18084 799 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 PTPREP23469 700 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 CYP3A7P24462 503 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 CIITAP33076 1130 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 ALDH5A1P51649 535 aaPredicted RBP17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 PLEKHH3Q7Z736 793 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 KCNG4Q8TDN1 519 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 NSUN6Q8TEA1 469 aaKnown RBP17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 ARHGAP39Q9C0H5 1083 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
SFSWAP-206ENST00000537582 ELP1O95163 1332 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms