RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 ECEL1O95672 775 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 SCG2P13521 617 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 PPP2R5DQ14738 602 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TRIM16LQ309B1 348 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TEDDM1Q5T9Z0 273 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TOGARAM2Q6ZUX3 1019 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TSPYL6Q8N831 410 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 OLFML3Q9NRN5 406 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 RCOR1Q9UKL0 485 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 C9orf84Q5VXU9 1444 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 GTPBP6O43824 516 aaPredicted RBP12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TSPY3P0CV98 308 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TSPY8P0CW00 308 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TSPY1Q01534 308 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 SFSWAPQ12872 951 aaKnown RBP12.81□□□□□ -0.36
POLR1B-216ENST00000537335 RABGAP1LQ5R372 815 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 ATG16L1Q676U5 607 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TMCO5AQ8N6Q1 288 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 SEC16BQ96JE7 1060 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 SPATA17Q96L03 361 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 FAM227BQ96M60 508 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
POLR1B-216ENST00000537335 WDR91A4D1P6 747 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 FTCDO95954 541 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 TRAF7Q6Q0C0 670 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 OMA1Q96E52 524 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 CATSPER2Q96P56 530 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ANAPC5Q9UJX4 755 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ASXL1Q8IXJ9 1541 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 A0A087WWV3 80 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 SYCE1LA8MT33 242 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 MAP4P27816 1152 aaKnown RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 DDIT3P35638 169 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 STX1BP61266 288 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ZBED6P86452 979 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 SMYD3Q9H7B4 428 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 INSRP06213 1382 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 MFAP3LO75121 409 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 FAM107AO95990 144 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 LDHCP07864 332 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 NCF2P19878 526 aaPredicted RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 YWHAGP61981 247 aaKnown RBP eCLIP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ARHGAP44Q17R89 818 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 TLK2Q86UE8 772 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ZNF274Q96GC6 653 aaPredicted RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 GPR101Q96P66 508 aaPredicted RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 NAP1L4Q99733 375 aaKnown RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 PIK3C2GO75747 1445 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 DAPK1P53355 1430 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 KCNJ6P48051 423 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 MRPS25P82663 173 aaKnown RBP12.8□□□□□ -0.36
POLR1B-216ENST00000537335 KCNF1Q9H3M0 494 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 HMGXB3Q12766 1538 aa12.8□□□□□ -0.36
POLR1B-216ENST00000537335 ATP1A3P13637 1013 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 DR1Q01658 176 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 IQCB1Q15051 598 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 SLC26A7Q8TE54 656 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 RUBCNQ92622 972 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 CUEDC2Q9H467 287 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 RAB20Q9NX57 234 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 STX18Q9P2W9 335 aaKnown RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 SEPT3Q9UH03 358 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 BAG3O95817 575 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 EPHB1P54762 984 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 DYMQ7RTS9 669 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 TESK2Q96S53 571 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 DIABLOQ9NR28 239 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 ANGPTL3Q9Y5C1 460 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 CCT8L1PA6NM43 557 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 TRIM16O95361 564 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 CYTH1Q15438 398 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 DAB2IPQ5VWQ8 1189 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 SPATA21Q7Z572 469 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 RFWD2Q8NHY2 731 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 DTX3LQ8TDB6 740 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 CYFIP2Q96F07 1278 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 NR1H4Q96RI1 486 aaPredicted RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 TGS1Q96RS0 853 aaKnown RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 NHEJ1Q9H9Q4 299 aaPredicted RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 UBTFL6P0CB48 400 aaPredicted RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 PDE6AP16499 860 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 CYP7A1P22680 504 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 VHLP40337 213 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 NR1H3Q13133 447 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 TRPM8Q7Z2W7 1104 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
POLR1B-216ENST00000537335 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
POLR1B-216ENST00000537335 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 HNRNPCL2B2RXH8 293 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 NOP56O00567 594 aaKnown RBP12.78□□□□□ -0.36
POLR1B-216ENST00000537335 XRCC5P13010 732 aaKnown RBP12.78□□□□□ -0.36
POLR1B-216ENST00000537335 PLS1Q14651 629 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 AKNAD1Q5T1N1 836 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 KLC3Q6P597 504 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 DPH6Q7L8W6 267 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 NELFCDQ8IXH7 590 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 CDKL2Q92772 493 aa12.78□□□□□ -0.36
POLR1B-216ENST00000537335 PHKBQ93100 1093 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms