RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 PIGOQ8TEQ8 1089 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 DNAI1Q9UI46 699 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 SUGT1Q9Y2Z0 365 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 CACNA1SQ13698 1873 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 WDR19Q8NEZ3 1342 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 DDX60Q8IY21 1712 aaKnown RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 TRAF5O00463 557 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 CUL4BQ13620 913 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 MCM6Q14566 821 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 KRT25Q7Z3Z0 450 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 CLMNQ96JQ2 1002 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 VPS16Q9H269 839 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 RPAP3Q9H6T3 665 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 FANCLQ9NW38 375 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 TMOD4Q9NZQ9 345 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 GDAQ9Y2T3 454 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 ABCB11O95342 1321 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 OR52Z1P0C646 297 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 YBX3P16989 372 aaKnown RBP eCLIP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 PRELPP51888 382 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 FUT2Q10981 343 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 SPDYE2Q495Y8 402 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 SYT10Q6XYQ8 523 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 SMCR8Q8TEV9 937 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 ZNF668Q96K58 619 aaPredicted RBP9.2□□□□□ -0.94
ABCA4-207ENST00000536513 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 KIAA1024Q9UPX6 916 aa9.2□□□□□ -0.94
ABCA4-207ENST00000536513 NF2P35240 595 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 CAP2P40123 477 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 NCBP1Q09161 790 aaKnown RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 TERF2Q15554 542 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 TXLNBQ8N3L3 684 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 ATG4CQ96DT6 458 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 NFE2L3Q9Y4A8 694 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 CHD4Q14839 1912 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 ANKRD36CQ5JPF3 1778 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 MYO3BQ8WXR4 1341 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 A0A087X0B3 334 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PLCG1P19174 1290 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PDE4DQ08499 809 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 CTTNQ14247 550 aaKnown RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PTPAQ15257 358 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 ERCC6LQ2NKX8 1250 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 GRIPAP1Q4V328 841 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 AGBL3Q8NEM8 1001 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 CHURC1Q8WUH1 139 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 TRIM47Q96LD4 638 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 ANO3Q9BYT9 981 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 FBXO2Q9UK22 296 aaPredicted RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 ENTPD3O75355 529 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PTPREP23469 700 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 HNRNPH2P55795 449 aaKnown RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 UBASH3AP57075 661 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 GABPAQ06546 454 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 CLEC17AQ6ZS10 378 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 METTL16Q86W50 562 aaKnown RBP9.19□□□□□ -0.94
ABCA4-207ENST00000536513 RDH13Q8NBN7 331 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 PPP1R13LQ8WUF5 828 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 RGL1Q9NZL6 768 aa9.19□□□□□ -0.94
ABCA4-207ENST00000536513 NPHP3-ACAD11A0A0J9YXS1 232 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 E9PMD0 336 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 NFIBO00712 420 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 CTAGE5O15320 804 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 PHACTR2O75167 634 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 LDHDQ86WU2 507 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 ANKRD35Q8N283 1001 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 CCDC47Q96A33 483 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 MAP3K14Q99558 947 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 ST7Q9NRC1 585 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 SAMSN1Q9NSI8 373 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 GINS2Q9Y248 185 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 CD2APQ9Y5K6 639 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 LOC102724159A0A0B4J2E5 919 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 TRIM49BA6NDI0 452 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 DCAF8L1A6NGE4 600 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 PTGER2P43116 358 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 PWP2Q15269 919 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 TCERG1LQ5VWI1 586 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 SNRNP48Q6IEG0 339 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 HS6ST3Q8IZP7 471 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 LZTS2Q9BRK4 669 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 IDI2Q9BXS1 227 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 POTECB2RU33 542 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 BACH1O14867 736 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 DCAF15Q66K64 600 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 WNK4Q96J92 1243 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 RAB34Q9BZG1 259 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 EXOC1Q9NV70 894 aa9.18□□□□□ -0.94
ABCA4-207ENST00000536513 HERC5Q9UII4 1024 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 SRPRBQ9Y5M8 271 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 PDS5AQ29RF7 1337 aaKnown RBP9.18□□□□□ -0.94
ABCA4-207ENST00000536513 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
ABCA4-207ENST00000536513 GCOM1H8Y6P7 765 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-207ENST00000536513 KIF2AO00139 706 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-207ENST00000536513 AP5Z1O43299 807 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms