RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 WWC2Q6AWC2 1192 aa4.6□□□□□ -1.67
SKA3-207ENST00000536239 DNAJC14Q6Y2X3 702 aaPredicted RBP4.6□□□□□ -1.67
SKA3-207ENST00000536239 TTLL6Q8N841 843 aa4.6□□□□□ -1.67
SKA3-207ENST00000536239 LCORQ96JN0 433 aaPredicted RBP4.6□□□□□ -1.67
SKA3-207ENST00000536239 MCMBPQ9BTE3 642 aa4.6□□□□□ -1.67
SKA3-207ENST00000536239 CD248Q9HCU0 757 aa4.6□□□□□ -1.67
SKA3-207ENST00000536239 GULP1Q9UBP9 304 aa4.6□□□□□ -1.67
SKA3-207ENST00000536239 DIS3Q9Y2L1 958 aaKnown RBP4.6□□□□□ -1.67
SKA3-207ENST00000536239 DDX3XO00571 662 aaKnown RBP eCLIP4.59□□□□□ -1.67
SKA3-207ENST00000536239 AURKAO14965 403 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 B4GALT3O60512 393 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 PPP2R5DQ14738 602 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 PRR31Q5SQ13 230 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 ETV3LQ6ZN32 361 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 STK32CQ86UX6 486 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 USP33Q8TEY7 942 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 FAM86C1Q9NVL1 165 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 GGT7Q9UJ14 662 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 ZNRF3Q9ULT6 936 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 SIT1Q9Y3P8 196 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 HS3ST3A1Q9Y663 406 aa4.59□□□□□ -1.67
SKA3-207ENST00000536239 NPEPPSL1A6NEC2 478 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 C9orf118A6NHY6 69 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 NTRK1P04629 796 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 TCEAL1Q15170 157 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 CD300LDQ6UXZ3 194 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 SND1Q7KZF4 910 aaKnown RBP eCLIP4.58□□□□□ -1.68
SKA3-207ENST00000536239 HS2ST1Q7LGA3 356 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 CPNE8Q86YQ8 564 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 FAM26EQ8N5C1 309 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 DNERQ8NFT8 737 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 TM9SF2Q99805 663 aa4.58□□□□□ -1.68
SKA3-207ENST00000536239 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.58□□□□□ -1.68
SKA3-207ENST00000536239 STXBP3O00186 592 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 GPR42O15529 346 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 VAMP4O75379 141 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 IMPDH2P12268 514 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 SEPHS1P49903 392 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 ITGA1P56199 1179 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 KLF10Q13118 480 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 ZYXQ15942 572 aaKnown RBP4.57□□□□□ -1.68
SKA3-207ENST00000536239 ZNF585AQ6P3V2 769 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 UNC5AQ6ZN44 842 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 PLEKHH3Q7Z736 793 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 MIB1Q86YT6 1006 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 DEF6Q9H4E7 631 aa4.57□□□□□ -1.68
SKA3-207ENST00000536239 C7orf72A4D263 438 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 C2orf71A6NGG8 1288 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 CBFA2T2O43439 604 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 FUCA1P04066 466 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 PAMP19021 973 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 DPY19L1Q2PZI1 675 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 CIR1Q86X95 450 aaPredicted RBP4.56□□□□□ -1.68
SKA3-207ENST00000536239 DCP2Q8IU60 420 aaKnown RBP4.56□□□□□ -1.68
SKA3-207ENST00000536239 PALM2Q8IXS6 379 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 RNF34Q969K3 372 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 WHRNQ9P202 907 aa4.56□□□□□ -1.68
SKA3-207ENST00000536239 ING1Q9UK53 422 aaPredicted RBP4.56□□□□□ -1.68
SKA3-207ENST00000536239 ZNF214Q9UL59 606 aaPredicted RBP4.56□□□□□ -1.68
SKA3-207ENST00000536239 NPHP3-ACAD11A0A0J9YXS1 232 aa4.55□□□□□ -1.68
SKA3-207ENST00000536239 NPHS1O60500 1241 aa4.55□□□□□ -1.68
SKA3-207ENST00000536239 R3HDM1Q15032 1099 aaKnown RBP4.55□□□□□ -1.68
SKA3-207ENST00000536239 ZC3H18Q86VM9 953 aaKnown RBP4.55□□□□□ -1.68
SKA3-207ENST00000536239 ADCY4Q8NFM4 1077 aa4.55□□□□□ -1.68
SKA3-207ENST00000536239 PLEKHO2Q8TD55 490 aa4.55□□□□□ -1.68
SKA3-207ENST00000536239 BACE2Q9Y5Z0 518 aa4.55□□□□□ -1.68
SKA3-207ENST00000536239 LTBP3Q9NS15 1303 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 TRBV23OR9-2A0A075B6M9 112 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 SGSM2O43147 1006 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 CYP1A1P04798 512 aaPredicted RBP4.54□□□□□ -1.68
SKA3-207ENST00000536239 ZNF28P17035 718 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 GUCY2CP25092 1073 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 PPP2CBP62714 309 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 PPP2CAP67775 309 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 RBM10P98175 930 aaKnown RBP4.54□□□□□ -1.68
SKA3-207ENST00000536239 PRAMEF18Q5VWM3 479 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 IGDCC4Q8TDY8 1250 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 MBD6Q96DN6 1003 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 WWC2-AS2Q96NR7 200 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 SPON2Q9BUD6 331 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 AP5M1Q9H0R1 490 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 SEMA4AQ9H3S1 761 aa4.54□□□□□ -1.68
SKA3-207ENST00000536239 PATE3B3GLJ2 98 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 MUSKO15146 869 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 SELENOPP49908 381 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 EPHB4P54760 987 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 ADAM9Q13443 819 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 SPDYAQ5MJ70 313 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 PKN3Q6P5Z2 889 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 RUFY4Q6ZNE9 571 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 ARHGEF18Q6ZSZ5 1173 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 KIAA0825Q8IV33 1275 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 RBBP8NLQ8NC74 664 aaPredicted RBP4.53□□□□□ -1.68
SKA3-207ENST00000536239 FERD3LQ96RJ6 166 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 HAUS7Q99871 368 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 TRAIPQ9BWF2 469 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 TCAF1Q9Y4C2 921 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 TESMINQ9Y4I5 508 aa4.53□□□□□ -1.68
SKA3-207ENST00000536239 ZNF623O75123 536 aa4.52□□□□□ -1.69
SKA3-207ENST00000536239 IL13P35225 146 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms