RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MICALCLQ6ZW33 695 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 CCDC13Q8IYE1 715 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 ZNF483Q8TF39 744 aaPredicted RBP15.52■□□□□ 0.08
LIG1-203ENST00000536218 CRAMP1Q96RY5 1269 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 RUFY1Q96T51 708 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 CPSF2Q9P2I0 782 aaKnown RBP15.52■□□□□ 0.08
LIG1-203ENST00000536218 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.52■□□□□ 0.08
LIG1-203ENST00000536218 CEP131Q9UPN4 1083 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 ATP2C2O75185 946 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 MCM3P25205 808 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 MCM7P33993 719 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 EYA3Q99504 573 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 SAMSN1Q9NSI8 373 aaKnown RBP15.52■□□□□ 0.08
LIG1-203ENST00000536218 IRAK4Q9NWZ3 460 aa15.52■□□□□ 0.08
LIG1-203ENST00000536218 TEX33O43247 280 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 RASA1P20936 1047 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 AFMP43652 599 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 MRPL12P52815 198 aaKnown RBP15.52■□□□□ 0.07
LIG1-203ENST00000536218 SPDL1Q96EA4 605 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 MMS19Q96T76 1030 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.07
LIG1-203ENST00000536218 SRPRBQ9Y5M8 271 aaKnown RBP15.52■□□□□ 0.07
LIG1-203ENST00000536218 GPR75-ASB3A0A0A6YYF3 556 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 ENO4A6NNW6 628 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 CASP1P29466 404 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 SMTNP53814 917 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 EIF6P56537 245 aaKnown RBP15.51■□□□□ 0.07
LIG1-203ENST00000536218 MRPS25P82663 173 aaKnown RBP15.51■□□□□ 0.07
LIG1-203ENST00000536218 NPY5RQ15761 445 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 C15orf52Q6ZUT6 534 aaKnown RBP15.51■□□□□ 0.07
LIG1-203ENST00000536218 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 SH2D3CQ8N5H7 860 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 STAMQ92783 540 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 TMCO5BA8MYB1 307 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 TTC38Q5R3I4 469 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 HEATR3Q7Z4Q2 680 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 NLGN1Q8N2Q7 840 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 FLT1P17948 1338 aa15.51■□□□□ 0.07
LIG1-203ENST00000536218 FMR1Q06787 632 aaKnown RBP eCLIP15.5■□□□□ 0.077e-8■■□□□ 12.6
LIG1-203ENST00000536218 PTGDRQ13258 359 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 PFKFB3Q16875 520 aaPredicted RBP15.5■□□□□ 0.07
LIG1-203ENST00000536218 DPP8Q6V1X1 898 aaPredicted RBP15.5■□□□□ 0.07
LIG1-203ENST00000536218 SP8Q8IXZ3 490 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 ZBTB10Q96DT7 871 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 TUBE1Q9UJT0 475 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 ECM29Q5VYK3 1845 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 SLURP2P0DP57 97 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 SRGNP10124 158 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 RHBDL3P58872 404 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 PARP9Q8IXQ6 854 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 SLF1Q9BQI6 1058 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 TTF2Q9UNY4 1162 aaKnown RBP15.5■□□□□ 0.07
LIG1-203ENST00000536218 DAGLAQ9Y4D2 1042 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 RTN2O75298 545 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 USP17L2Q6R6M4 530 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 ARL8AQ96BM9 186 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 RRP36Q96EU6 259 aaKnown RBP15.5■□□□□ 0.07
LIG1-203ENST00000536218 VCPKMTQ9H867 229 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 KCNQ5Q9NR82 932 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 TRIM10Q9UDY6 481 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 ATP6V0A2Q9Y487 856 aa15.5■□□□□ 0.07
LIG1-203ENST00000536218 CDC25AP30304 524 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 POSTNQ15063 836 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 TYW1BQ6NUM6 668 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 TBC1D31Q96DN5 1066 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 PANX2Q96RD6 677 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 TMX4Q9H1E5 349 aaPredicted RBP15.49■□□□□ 0.07
LIG1-203ENST00000536218 DBNDD1Q9H9R9 158 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 CCDC88AQ3V6T2 1871 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 CASP14P31944 242 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 CLEC10AQ8IUN9 316 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 SYMPKQ92797 1274 aaKnown RBP15.49■□□□□ 0.07
LIG1-203ENST00000536218 SH3GL3Q99963 347 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
LIG1-203ENST00000536218 A0A087X0B3 334 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 BMP6P22004 513 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 SEC24CP53992 1094 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 GUCY1A3Q02108 690 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 KLHL10Q6JEL2 608 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 CERS5Q8N5B7 392 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 THOC1Q96FV9 657 aaKnown RBP15.48■□□□□ 0.07
LIG1-203ENST00000536218 ETAA1Q9NY74 926 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 UBR3Q6ZT12 1888 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 FAM237AA0A1B0GTK4 181 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 KLRF2D3W0D1 207 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 CYTH3O43739 400 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 CAND2O75155 1236 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 RASSF9O75901 435 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 PLCG2P16885 1265 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 GRIK3Q13003 919 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 SLC35G1Q2M3R5 365 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 NAA35Q5VZE5 725 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 SLF2Q8IX21 1173 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 UBA5Q9GZZ9 404 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 MYH6P13533 1939 aa15.48■□□□□ 0.07
LIG1-203ENST00000536218 GOLGA8KD6RF30 607 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms