RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 INPP5BP32019 993 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 TXKP42681 527 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 DHTKD1Q96HY7 919 aaPredicted RBP14.87□□□□□ -0.03
HDAC4-214ENST00000535493 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
HDAC4-214ENST00000535493 PYM1Q9BRP8 204 aaKnown RBP14.87□□□□□ -0.03
HDAC4-214ENST00000535493 NDST4Q9H3R1 872 aa14.87□□□□□ -0.03
HDAC4-214ENST00000535493 ZNF233A6NK53 670 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 ERVV-1B6SEH8 477 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 CALML3P27482 149 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 IL6STP40189 918 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-214ENST00000535493 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 SH3GL2Q99962 352 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 NUP58Q9BVL2 599 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 TCP11L1Q9NUJ3 509 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 FLT1P17948 1338 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 HPDP32754 393 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-214ENST00000535493 SF3A3Q12874 501 aaKnown RBP eCLIP14.86□□□□□ -0.037e-8■■□□□ 13.8
HDAC4-214ENST00000535493 MMS22LQ6ZRQ5 1243 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-214ENST00000535493 CELF1Q92879 486 aaKnown RBP14.86□□□□□ -0.03
HDAC4-214ENST00000535493 TBC1D7Q9P0N9 293 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 TAF1P21675 1872 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 DISP2A7MBM2 1401 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 TOGARAM1Q9Y4F4 1720 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 HEXIM1O94992 359 aaKnown RBP14.86□□□□□ -0.03
HDAC4-214ENST00000535493 VWA3BQ502W6 1294 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 KLHDC7AQ5VTJ3 777 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 KRT12Q99456 494 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 MAD2L2Q9UI95 211 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 HYOU1Q9Y4L1 999 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 DUOX1Q9NRD9 1551 aa14.86□□□□□ -0.03
HDAC4-214ENST00000535493 CICQ96RK0 1608 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-214ENST00000535493 M0R2N6 131 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 KIF5BP33176 963 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 PAFAH1B1P43034 410 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 EPHB4P54760 987 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 ERFEQ4G0M1 354 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 OR2W6PQ8NHA6 318 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 BIN2Q9UBW5 565 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-214ENST00000535493 SIK3Q9Y2K2 1263 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 BCORQ6W2J9 1755 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 NUP98P52948 1817 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 H0YHG0 523 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 FGRP09769 529 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 ATP6V1AP38606 617 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 CRKLP46109 303 aaKnown RBP14.85□□□□□ -0.03
HDAC4-214ENST00000535493 INTS5Q6P9B9 1019 aaKnown RBP14.85□□□□□ -0.03
HDAC4-214ENST00000535493 TXNRD3Q86VQ6 643 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 KLHL7Q8IXQ5 586 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 ERGIC2Q96RQ1 377 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 MMTAG2Q9BU76 263 aaKnown RBP14.85□□□□□ -0.03
HDAC4-214ENST00000535493 TMEM260Q9NX78 707 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 MINPP1Q9UNW1 487 aa14.85□□□□□ -0.03
HDAC4-214ENST00000535493 PARP4Q9UKK3 1724 aaKnown RBP14.84□□□□□ -0.03
HDAC4-214ENST00000535493 BICDL2A1A5D9 508 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 MYMKA6NI61 221 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 GOLGA8KD6RF30 607 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 PALMO75781 387 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 NTSR2O95665 410 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 HSPA2P54652 639 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 EHHADHQ08426 723 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 RNF187Q5TA31 235 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-214ENST00000535493 RETREG2Q8NC44 543 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 ALS2CR12Q96Q35 445 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 PACSIN1Q9BY11 444 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 CCSER1Q9C0I3 900 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 MKNK2Q9HBH9 465 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 SAP30BPQ9UHR5 308 aaKnown RBP14.84□□□□□ -0.03
HDAC4-214ENST00000535493 STXBP3O00186 592 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 OPA1O60313 960 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 NAPAP54920 295 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 ZNF662Q6ZS27 426 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.84□□□□□ -0.03
HDAC4-214ENST00000535493 TSGA10Q9BZW7 698 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 ZNF804BA4D1E1 1349 aa14.84□□□□□ -0.03
HDAC4-214ENST00000535493 DOCK2Q92608 1830 aa14.83□□□□□ -0.03
HDAC4-214ENST00000535493 POTEMA6NI47 508 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 CFAP58Q5T655 872 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 USP17L2Q6R6M4 530 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 DDX42Q86XP3 938 aaKnown RBP eCLIP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 ZSCAN29Q8IWY8 852 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 CRNKL1Q9BZJ0 848 aaKnown RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 ORC4O43929 436 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 CAMTA2O94983 1202 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 CPP00450 1065 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 OR52Z1P0C646 297 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 TCP1P17987 556 aaKnown RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 MAATS1Q7Z4T9 603 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
HDAC4-214ENST00000535493 PPANQ9NQ55 473 aaKnown RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 ZNF142P52746 1687 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-214ENST00000535493 PAPPAQ13219 1627 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 LSP1P33241 339 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 DIXDC1Q155Q3 683 aa14.82□□□□□ -0.04
HDAC4-214ENST00000535493 OTUD6BQ8N6M0 293 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms