RNA–Protein interactions for RNA: ENST00000535283.5

DDB1-206, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-206ENST00000535283 U2AF1L4Q8WU68 220 aaKnown RBP11.15□□□□□ -0.62
DDB1-206ENST00000535283 ZKSCAN4Q969J2 545 aaPredicted RBP11.15□□□□□ -0.62
DDB1-206ENST00000535283 COA7Q96BR5 231 aa11.15□□□□□ -0.62
DDB1-206ENST00000535283 RNF208Q9H0X6 261 aa11.15□□□□□ -0.62
DDB1-206ENST00000535283 NUP62CLQ9H1M0 184 aa11.15□□□□□ -0.62
DDB1-206ENST00000535283 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
DDB1-206ENST00000535283 PCDHA7Q9UN72 937 aa11.15□□□□□ -0.62
DDB1-206ENST00000535283 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L17D6RBQ6 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L19D6RCP7 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L20D6RJB6 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 MARCH6O60337 910 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 TLR2O60603 784 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 GADD45BO75293 160 aaPredicted RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 ICAM1P05362 532 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 VCAM1P19320 739 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 GRK4P32298 578 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 OAZ1P54368 228 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 USP17L24Q0WX57 530 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 SHROOM1Q2M3G4 852 aaPredicted RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 SH3D19Q5HYK7 790 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 L1TD1Q5T7N2 865 aaKnown RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 KANK3Q6NY19 840 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 FASTKD5Q7L8L6 764 aaKnown RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 FSIP1Q8NA03 581 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 PROCA1Q8NCQ7 364 aaPredicted RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 TNFRSF25Q93038 417 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 GZF1Q9H116 711 aaPredicted RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 CPVLQ9H3G5 476 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 SRPRBQ9Y5M8 271 aaKnown RBP11.14□□□□□ -0.63
DDB1-206ENST00000535283 STK24Q9Y6E0 443 aa11.14□□□□□ -0.63
DDB1-206ENST00000535283 MGAMO43451 1857 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 GCOM1H8Y6P7 765 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 M0R2N6 131 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PIK3CDO00329 1044 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 POLR2MP0CAP2 368 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 COL9A1P20849 921 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PTPREP23469 700 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 MARCKSP29966 332 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 LONP1P36776 959 aaKnown RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 PRPHP41219 470 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 USP11P51784 963 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 VGLL4Q14135 290 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 COG2Q14746 738 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 KIF22Q14807 665 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PTPAQ15257 358 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 NPY5RQ15761 445 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 SLC35G1Q2M3R5 365 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 TKFCQ3LXA3 575 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 DTHD1Q6ZMT9 781 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 RASGRP2Q7LDG7 609 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 GTF3C2Q8WUA4 911 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 ANP32BQ92688 251 aaKnown RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 TNMDQ9H2S6 317 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 RPAP3Q9H6T3 665 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 BIN2Q9UBW5 565 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 SRRDQ9UH36 339 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 USP25Q9UHP3 1055 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 CCPG1Q9ULG6 757 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PPP1R9AQ9ULJ8 1098 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 ZMYND8Q9ULU4 1186 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 AFG3L2Q9Y4W6 797 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
DDB1-206ENST00000535283 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
DDB1-206ENST00000535283 GOLGA6L3A6NEY3 463 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 NEMFO60524 1076 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 CCNT1O60563 726 aaKnown RBP11.12□□□□□ -0.63
DDB1-206ENST00000535283 CAVIN2O95810 425 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 OSBPP22059 807 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 MCM7P33993 719 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 BMP8BP34820 402 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 COPB2P35606 906 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 SYKP43405 635 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 HMGCS2P54868 508 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 ZNF445P59923 1031 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 ATP2C1P98194 919 aaPredicted RBP11.12□□□□□ -0.63
DDB1-206ENST00000535283 PPIL2Q13356 520 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 ZNF174Q15697 407 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 INF2Q27J81 1249 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 LETM2Q2VYF4 491 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 LRIT3Q3SXY7 679 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 USH1GQ495M9 461 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 TPRNQ4KMQ1 711 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 JAKMIP3Q5VZ66 844 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 PPP4R3AQ6IN85 833 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
DDB1-206ENST00000535283 CCDC174Q6PII3 467 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms