RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
MCF2L-232ENST00000535094 LRRC10BA6NIK2 292 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 PALMO75781 387 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 MAP2K2P36507 400 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 GNAQP50148 359 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 CCDC91Q7Z6B0 441 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 POTEDQ86YR6 584 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 OR2W6PQ8NHA6 318 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 GJA10Q969M2 543 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 DPH5Q9H2P9 285 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 DCP1AQ9NPI6 582 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 FRMPD2Q68DX3 1309 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 MRC1P22897 1456 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 LAMA4Q16363 1823 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 MYH8P13535 1937 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 IKQ13123 557 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 SFMBT2Q5VUG0 894 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 ZNF512BQ96KM6 892 aaPredicted RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 CARD10Q9BWT7 1032 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 A0A1W2PQC6 194 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 POTEMA6NI47 508 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 FGFR2P21802 821 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 ARL6IP4Q66PJ3 421 aaKnown RBP17.57■□□□□ 0.4
MCF2L-232ENST00000535094 TBCKQ8TEA7 893 aa17.57■□□□□ 0.4
MCF2L-232ENST00000535094 EIF3HO15372 352 aaKnown RBP eCLIP17.56■□□□□ 0.49e-7■■□□□ 12.4
MCF2L-232ENST00000535094 VWA3BQ502W6 1294 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 TTI2Q6NXR4 508 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 FAM133AQ8N9E0 248 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 TRIM9Q9C026 710 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 TARSL2A2RTX5 802 aaKnown RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 EPHB6O15197 1021 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 NR1D1P20393 614 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 CALCRLQ16602 461 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 CABS1Q96KC9 395 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 PDS5AQ29RF7 1337 aaKnown RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 SPATA31A3Q5VYP0 1347 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 ANO9A1A5B4 782 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 MPHOSPH10O00566 681 aaKnown RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 KLRK1P26718 216 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 CTNNA1P35221 906 aaKnown RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 HERC4Q5GLZ8 1057 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 MCTP2Q6DN12 878 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 PAXIP1Q6ZW49 1069 aaPredicted RBP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 RAB34Q9BZG1 259 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 ARHGAP20Q9P2F6 1191 aa17.56■□□□□ 0.4
MCF2L-232ENST00000535094 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.56■□□□□ 0.4
MCF2L-232ENST00000535094 NKRFO15226 690 aaKnown RBP eCLIP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 ACTN3Q08043 901 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 PICALMQ13492 652 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 SELENOSQ9BQE4 189 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 TMEM260Q9NX78 707 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 FRMD3A2A2Y4 597 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 TNNC1P63316 161 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 E2F5Q15329 346 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 DDX42Q86XP3 938 aaKnown RBP eCLIP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 RETREG2Q8NC44 543 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 CCDC87Q9NVE4 849 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 F8W031 263 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 FAM153BP0C7A2 387 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 FAM153CQ494X1 144 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 GIMAP8Q8ND71 665 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 COA7Q96BR5 231 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 MYCBPQ99417 103 aaPredicted RBP17.55■□□□□ 0.4
MCF2L-232ENST00000535094 FAM153AQ9UHL3 310 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 ZNF652Q9Y2D9 606 aa17.55■□□□□ 0.4
MCF2L-232ENST00000535094 ARHGAP23Q9P227 1491 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 GNA11P29992 359 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 CRKLP46109 303 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 RPS6KA1Q15418 735 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 ERFEQ4G0M1 354 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 NEK8Q86SG6 692 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 REXO1Q8N1G1 1221 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 DUSP9Q99956 384 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 GCOM1H8Y6P7 765 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 MYZAPP0CAP1 466 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 LLGL1Q15334 1064 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 KRT71Q3SY84 523 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 RNPC3Q96LT9 517 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 GPR101Q96P66 508 aaPredicted RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 SH2D4AQ9H788 454 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 AGPSO00116 658 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 HNRNPH1P31943 449 aaKnown RBP17.54■□□□□ 0.4
MCF2L-232ENST00000535094 CREG2Q8IUH2 290 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 PCDHA6Q9UN73 950 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 PLAAQ9Y263 795 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 PCDHA8Q9Y5H6 950 aa17.54■□□□□ 0.4
MCF2L-232ENST00000535094 GLI1P08151 1106 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 MAN2A1Q16706 1144 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 NAALADL2Q58DX5 795 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 EMBQ6PCB8 327 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 CELF1Q92879 486 aaKnown RBP17.53■□□□□ 0.4
MCF2L-232ENST00000535094 RHOBTB3O94955 611 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
MCF2L-232ENST00000535094 SF3B2Q13435 895 aaKnown RBP17.53■□□□□ 0.4
MCF2L-232ENST00000535094 TRADDQ15628 312 aa17.53■□□□□ 0.4
MCF2L-232ENST00000535094 ZNF263O14978 683 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms