RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-213ENST00000534532 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 SPATA24Q86W54 205 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 IFT122Q9HBG6 1241 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 PPP2R5CQ13362 524 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 MTX1Q13505 466 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 DGKHQ86XP1 1220 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 FAM81BQ96LP2 452 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 CYP19A1P11511 503 aaPredicted RBP17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 SYNMO15061 1565 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 KIF1BO60333 1816 aa17.23■□□□□ 0.35
NCAPD3-213ENST00000534532 PSDA5PKW4 1024 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 MYL3P08590 195 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 SCRN1Q12765 414 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 CUL4BQ13620 913 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 VPS72Q15906 364 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 MAP7D3Q8IWC1 876 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 PIH1D3Q9NQM4 214 aaKnown RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 SLC12A6Q9UHW9 1150 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 CRB1P82279 1406 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 FYB2Q5VWT5 728 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 OSBP2Q969R2 916 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 MKRN1Q9UHC7 482 aaKnown RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 AXIN2Q9Y2T1 843 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 TPD52P55327 224 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 KLHL7Q8IXQ5 586 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 RASGRP4Q8TDF6 673 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 MICAL1Q8TDZ2 1067 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 CACNB3P54284 484 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 MYL7Q01449 175 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 GIMAP8Q8ND71 665 aaPredicted RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 CACYBPQ9HB71 228 aaKnown RBP17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 ZNF233A6NK53 670 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 IFNB1P01574 187 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 HDXQ7Z353 690 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 ATP2A3Q93084 1043 aa17.22■□□□□ 0.35
NCAPD3-213ENST00000534532 A6NJR5 290 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 EVCP57679 992 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 CCDC121Q6ZUS5 278 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 NME8Q8N427 588 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 PSMC2P35998 433 aaKnown RBP17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 MYO1EQ12965 1108 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 EXOC3L4Q17RC7 722 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 LONRF2Q1L5Z9 754 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 SP8Q8IXZ3 490 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 PCDHB4Q9Y5E5 795 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 CDHR2Q9BYE9 1310 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 USP17L10C9JJH3 530 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 SURF1Q15526 300 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 STXBP2Q15833 593 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 RIC8AQ9NPQ8 531 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 STK17AQ9UEE5 414 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 FEM1BQ9UK73 627 aa17.21■□□□□ 0.35
NCAPD3-213ENST00000534532 PGBD1Q96JS3 809 aa17.21■□□□□ 0.34
NCAPD3-213ENST00000534532 PRPF3O43395 683 aaKnown RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 ARPP19P56211 112 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 GOLGA8CPA6NN73 597 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 GADD45BO75293 160 aaPredicted RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 POLR2FP61218 127 aaKnown RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 TICAM2Q86XR7 235 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 FAM149B1Q96BN6 582 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 SYNJ2BP-COX16A0A087WUM0 186 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 TFAMQ00059 246 aaKnown RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 DNAJC21Q5F1R6 531 aaKnown RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 SH3RF3Q8TEJ3 882 aaPredicted RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 FAM167AQ96KS9 214 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 CLIC6Q96NY7 704 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 COX16Q9P0S2 106 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 PCDHA7Q9UN72 937 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 MTMR6Q9Y217 621 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 CYP2D7A0A087X1C5 515 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 SH2B2O14492 632 aaPredicted RBP17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 GRK7Q8WTQ7 553 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 RAB17Q9H0T7 212 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 CCDC68Q9H2F9 335 aa17.2■□□□□ 0.34
NCAPD3-213ENST00000534532 IFNAR1P17181 557 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 PPP2R5EQ16537 467 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 INTS8Q75QN2 995 aaKnown RBP17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 ZNF589Q86UQ0 364 aaPredicted RBP17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 FAM76AQ8TAV0 307 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 TCP11Q8WWU5 503 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 H2AFZP0C0S5 128 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 NR2F2P24468 414 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 NFX1Q12986 1120 aaKnown RBP17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 H2AFVQ71UI9 128 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 PI4K2BQ8TCG2 481 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 ZSWIM5Q9P217 1185 aa17.19■□□□□ 0.34
NCAPD3-213ENST00000534532 KCNQ2O43526 872 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms