RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 CAPN6Q9Y6Q1 641 aa6.98□□□□□ -1.29
CLNS1A-212ENST00000533957 CRB1P82279 1406 aa6.98□□□□□ -1.29
CLNS1A-212ENST00000533957 COL18A1P39060 1754 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 OVOS2A0A0G2JMS6 1433 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 H3BS24 57 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 GLI1P08151 1106 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 GDNFP39905 211 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 WIPI1Q5MNZ9 446 aaPredicted RBP6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 LETMD1Q6P1Q0 360 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 ERC1Q8IUD2 1116 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 FAM184AQ8NB25 1140 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 NGDNQ8NEJ9 315 aaKnown RBP6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 DDX17Q92841 729 aaKnown RBP6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 KIRREL1Q96J84 757 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 FRMD6Q96NE9 622 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 PPP1R9BQ96SB3 815 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 IVNS1ABPQ9Y6Y0 642 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 DLG5Q8TDM6 1919 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 SPATA31A6Q5VVP1 1343 aa6.97□□□□□ -1.29
CLNS1A-212ENST00000533957 FAM208AQ9UK61 1670 aaKnown RBP6.96□□□□□ -1.29
CLNS1A-212ENST00000533957 GFRA2O00451 464 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 CBX7O95931 251 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 CST3P01034 146 aaPredicted RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 LDHBP07195 334 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 P4HBP07237 508 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 SDSP20132 328 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 PDE1AP54750 535 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 RRS1Q15050 365 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 GLIPR1L2Q4G1C9 344 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 TMEM67Q5HYA8 995 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 LCE4AQ5TA78 99 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 PRR23BQ6ZRT6 265 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 CILP2Q8IUL8 1156 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 DDX49Q9Y6V7 483 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 BRWD3Q6RI45 1802 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 TTC41PQ6P2S7 1318 aa6.96□□□□□ -1.3
CLNS1A-212ENST00000533957 ATP10DQ9P241 1426 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 RBAK-RBAKDNI3L0D1 243 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 ALDH1L1O75891 902 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 BAG4O95429 457 aaKnown RBP6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 GRK4P32298 578 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 RAP1GAPP47736 663 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 CUL4AQ13619 759 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 UBE2FQ969M7 185 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 KIF1BPQ96EK5 621 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 GPATCH3Q96I76 525 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 NFAT5O94916 1531 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 ABCC6O95255 1503 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 SPATA31A3Q5VYP0 1347 aa6.95□□□□□ -1.3
CLNS1A-212ENST00000533957 NCAPD2Q15021 1401 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 ELL2O00472 640 aaPredicted RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 TPM3P06753 285 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MX1P20591 662 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 EIF4BP23588 611 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 RPS26P62854 115 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MTX1Q13505 466 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MTHFSDQ2M296 383 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 KRTAP19-4Q3LI73 84 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 PLEKHO1Q53GL0 409 aaPredicted RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 HSP90AB2PQ58FF8 381 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 THAP5Q7Z6K1 395 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MTERF4Q7Z6M4 381 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 CDH24Q86UP0 819 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 CNTROBQ8N137 903 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 XAGE3Q8WTP9 111 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 IP6K1Q92551 441 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 LRRC59Q96AG4 307 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 ZSCAN31Q96LW9 406 aaPredicted RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 ZSWIM5Q9P217 1185 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 PCDHB5Q9Y5E4 795 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 TACC3Q9Y6A5 838 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MAP3K19Q56UN5 1328 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 WDR33Q9C0J8 1336 aaKnown RBP6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 GLI3P10071 1580 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 MAP3K5Q99683 1374 aa6.94□□□□□ -1.3
CLNS1A-212ENST00000533957 RGS12O14924 1447 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 SLIT2O94813 1529 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 GLRX3O76003 335 aaKnown RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 DDX58O95786 925 aaKnown RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 UBTFL1P0CB47 393 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 GSPT1P15170 499 aaKnown RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 CYP7A1P22680 504 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 CFPP27918 469 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 GNA15P30679 374 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 NASPP49321 788 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 XPCQ01831 940 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 KCNA1Q09470 495 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 CCDC85BQ15834 202 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 SYDE1Q6ZW31 735 aaPredicted RBP6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 CCDC120Q96HB5 630 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 COX4I2Q96KJ9 171 aa6.93□□□□□ -1.3
CLNS1A-212ENST00000533957 ALPK1Q96QP1 1244 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms