RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 ENC1O14682 589 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 SLC27A2O14975 620 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 NPHP1O15259 732 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 GHRHP01286 108 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 BMP4P12644 408 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 HOXD8P13378 290 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 ATF4P18848 351 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 ADD2P35612 726 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 GJA8P48165 433 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 LIG3P49916 1009 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 UBE3CQ15386 1083 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 PLA2G4EQ3MJ16 856 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 CREB3L3Q68CJ9 461 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 ZSCAN25Q6NSZ9 544 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 CCDC129Q6ZRS4 1044 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 FAM35AQ86V20 835 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 KIAA0825Q8IV33 1275 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 GOLGA6L1Q8N7Z2 621 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 GALNT6Q8NCL4 622 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 TTC14Q96N46 770 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 CRAMP1Q96RY5 1269 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 SEC62Q99442 399 aaKnown RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHKA-208ENST00000533910 DSCC1Q9BVC3 393 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 BHLHE41Q9C0J9 482 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.76□□□□□ -1.33
CHKA-208ENST00000533910 LACRTQ9GZZ8 138 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 PIH1D3Q9NQM4 214 aaKnown RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
CHKA-208ENST00000533910 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 NAGPAQ9UK23 515 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 PCDHB5Q9Y5E4 795 aa6.76□□□□□ -1.33
CHKA-208ENST00000533910 TCRBV5S4A2TA0A5A2 114 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 FOXP2O15409 715 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 FGRP09769 529 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 PDE6AP16499 860 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 ZKSCAN1P17029 563 aaPredicted RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 TFE3P19532 575 aaPredicted RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 ITPKAP23677 461 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 CDC25BP30305 580 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 NEK4P51957 841 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 EZH2Q15910 746 aaKnown RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 PERM1Q5SV97 790 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 GIMAP6Q6P9H5 292 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 C15orf52Q6ZUT6 534 aaKnown RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 SV2BQ7L1I2 683 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 ALYREFQ86V81 257 aaKnown RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 FBXO27Q8NI29 283 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 STK35Q8TDR2 534 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 OSBP2Q969R2 916 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 RBM17Q96I25 401 aaKnown RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 RHOVQ96L33 236 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 BRIP1Q9BX63 1249 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 GPN3Q9UHW5 284 aaPredicted RBP6.75□□□□□ -1.33
CHKA-208ENST00000533910 TRIM33Q9UPN9 1127 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 EFR3BQ9Y2G0 817 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 C10orf71Q711Q0 1435 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 ZMYM6O95789 1325 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 XDHP47989 1333 aa6.75□□□□□ -1.33
CHKA-208ENST00000533910 DDX60LQ5H9U9 1706 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 WTIPA6NIX2 430 aaPredicted RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 PIK3R2O00459 728 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 TLR3O15455 904 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 BBOX1O75936 387 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 MMP10P09238 476 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 HSPD1P10809 573 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 XRCC5P13010 732 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 GARTP22102 1010 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 KLRK1P26718 216 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 CRKP46108 304 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 BAG6P46379 1132 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 GYG1P46976 350 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 KCNJ4P48050 445 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 NASPP49321 788 aaPredicted RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 CUL4AQ13619 759 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 KRT32Q14532 448 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 ZNF423Q2M1K9 1284 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 ADCK5Q3MIX3 580 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 CCDC144BQ3MJ40 725 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 CAVIN4Q5BKX8 364 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 ZNF468Q5VIY5 522 aaPredicted RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 HGSNATQ68CP4 663 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 TTBK2Q6IQ55 1244 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 TMED8Q6PL24 325 aaPredicted RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 VPS37DQ86XT2 251 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 GOLM1Q8NBJ4 401 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 EDARADDQ8WWZ3 215 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 PLD4Q96BZ4 506 aa6.74□□□□□ -1.33
CHKA-208ENST00000533910 FAM84BQ96KN1 310 aaPredicted RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 UPF3BQ9BZI7 483 aaKnown RBP6.74□□□□□ -1.33
CHKA-208ENST00000533910 SMG9Q9H0W8 520 aaKnown RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms