RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 KIFC2Q96AC6 838 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 P2RX7Q99572 595 aaKnown RBP12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 ZFYVE28Q9HCC9 887 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 FBXO28Q9NVF7 368 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 PPP1R9AQ9ULJ8 1098 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 CEP131Q9UPN4 1083 aa12.52□□□□□ -0.41
CCDC90B-218ENST00000533761 ESYT2A0FGR8 921 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 FIBPO43427 364 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 CYTH3O43739 400 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 DTNBO60941 627 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 BMP15O95972 392 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 SLC16A2P36021 539 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 MYSM1Q5VVJ2 828 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 MCTP2Q6DN12 878 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 TTBK2Q6IQ55 1244 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 LBX2Q6XYB7 198 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 ADGRF4Q8IZF3 695 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 MB21D1Q8N884 522 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 KCNG4Q8TDN1 519 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 PCDHA4Q9UN74 947 aa12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
CCDC90B-218ENST00000533761 PCNTO95613 3336 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 THSD7BQ9C0I4 1608 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 SPDYE16A6NNV3 312 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 VWA5AO00534 786 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 TLR2O60603 784 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 ZBED4O75132 1171 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 PRPF40AO75400 957 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 TRPA1O75762 1119 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 UBE2HP62256 183 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 SF3A1Q15459 793 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 SYDE2Q5VT97 1194 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 DAGLBQ8NCG7 672 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 SYAP1Q96A49 352 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 PIGSQ96S52 555 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 UBA5Q9GZZ9 404 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 POLR3EQ9NVU0 708 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 RNF186Q9NXI6 227 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 SAGE1Q9NXZ1 904 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR12Q9ULL5 1215 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 ADAMTS5Q9UNA0 930 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 KCNJ14Q9UNX9 436 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 CNPY2Q9Y2B0 182 aa12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 DDX49Q9Y6V7 483 aaKnown RBP12.5□□□□□ -0.41
CCDC90B-218ENST00000533761 hCG_1642624A0A1W2PR95 340 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 YEATS4O95619 227 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR20EP86478 221 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR20CP86479 221 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR20DP86480 221 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR20BP86481 221 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 PRR20AP86496 221 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 CRHR2Q13324 411 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 WWC2Q6AWC2 1192 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 BLIDQ8IZY5 108 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 ATG4CQ96DT6 458 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 AMNQ9BXJ7 453 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 CFHR5Q9BXR6 569 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 ZMYND12Q9H0C1 365 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 JMJD4Q9H9V9 463 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 RABGAP1Q9Y3P9 1069 aa12.49□□□□□ -0.41
CCDC90B-218ENST00000533761 CCDC194A0A1B0GVG4 234 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 BTBD18B2RXH4 712 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 STXBP3O00186 592 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 TRAK2O60296 914 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 SLC19A1P41440 591 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 MRPL12P52815 198 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 STK38Q15208 465 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 CDC37Q16543 378 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 KLHL40Q2TBA0 621 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 GPKOWQ92917 476 aaPredicted RBP eCLIP12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 CUL5Q93034 780 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 MTMR8Q96EF0 704 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 CPVLQ9H3G5 476 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 SLC38A10Q9HBR0 1119 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 RTEL1Q9NZ71 1219 aa12.48□□□□□ -0.41
CCDC90B-218ENST00000533761 LOC100996750A0A140TA64 210 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 ADCY7P51828 1080 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 OAZ1P54368 228 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 KRT25Q7Z3Z0 450 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 ANKRD13CQ8N6S4 541 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 LEO1Q8WVC0 666 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 KRTAP4-6Q9BYQ5 205 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 GJB4Q9NTQ9 266 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 LMBRD1Q9NUN5 540 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 RLFQ13129 1914 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 ATP2A1O14983 1001 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 TBC1D8O95759 1140 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 CCNA1P78396 465 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 PLS1Q14651 629 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 FAM110CQ1W6H9 321 aa12.47□□□□□ -0.41
CCDC90B-218ENST00000533761 ANO1Q5XXA6 986 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms