RNA–Protein interactions for RNA: ENST00000533259.1

PDE4DIP-231, Transcript of phosphodiesterase 4D interacting protein, human

TSL 4

Gene PDE4DIP, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE4DIP-231	ENST00000533259	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.49	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PRDM12	Q9H4Q4	367 aa		12.49	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PRDM6	Q9NQX0	595 aa		12.49	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	ADD3	Q9UEY8	706 aa	Known RBP	12.49	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	SCN10A	Q9Y5Y9	1956 aa		12.49	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PTPDC1	A2A3K4	754 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259		E7EWF7	191 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	EDNRB	P24530	442 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PURA	Q00577	322 aa	Known RBP	12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	SLC30A10	Q6XR72	485 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	OTOP2	Q7RTS6	562 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TBC1D10C	Q8IV04	446 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RASEF	Q8IZ41	740 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	SCLY	Q96I15	445 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	YBX2	Q9Y2T7	364 aa	Known RBP	12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	XIRP2	A4UGR9	3374 aa		12.48	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TET1	Q8NFU7	2136 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	BDP1	A6H8Y1	2624 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	SCN5A	Q14524	2016 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259		B4E1Z4	1266 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PC	P11498	1178 aa	Known RBP	12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	CALML3	P27482	149 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RPS6	P62753	249 aa	Known RBP	12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	KRT32	Q14532	448 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RNF207	Q6ZRF8	634 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RALYL	Q86SE5	291 aa	Known RBP	12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	NCOA7	Q8NI08	942 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TBC1D5	Q92609	795 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	COPS5	Q92905	334 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	KRT23	Q9C075	422 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	NKX2-4	Q9H2Z4	354 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	CNNM2	Q9H8M5	875 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TRMT13	Q9NUP7	481 aa	Known RBP	12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	POLR3E	Q9NVU0	708 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	MSRA	Q9UJ68	235 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	SNX14	Q9Y5W7	946 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TAF6L	Q9Y6J9	622 aa		12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TRIP12	Q14669	1992 aa	Predicted RBP	12.47	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	WDR19	Q8NEZ3	1342 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259		A6NJR5	290 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	GOLGA8H	P0CJ92	632 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	CYP2C9	P11712	490 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	MYOG	P15173	224 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RABGGTB	P53611	331 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RAB30	Q15771	203 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	NBPF20	Q3BBV1	942 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	DGKH	Q86XP1	1220 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RPUSD2	Q8IZ73	545 aa	Known RBP	12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	RGS22	Q8NE09	1264 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	DNER	Q8NFT8	737 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	OR6J1	Q8NGC5	347 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PPP1R13L	Q8WUF5	828 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	ANKS1A	Q92625	1134 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	ESR2	Q92731	530 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	JAKMIP1	Q96N16	626 aa	Known RBP	12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	NEK1	Q96PY6	1258 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	ZKSCAN3	Q9BRR0	538 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	MTG1	Q9BT17	334 aa	Predicted RBP	12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	UBA5	Q9GZZ9	404 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	CPVL	Q9H3G5	476 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	PNMA2	Q9UL42	364 aa		12.46	□□□□□ -0.41
PDE4DIP-231	ENST00000533259	TNKS	O95271	1327 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	NEDD4	P46934	1319 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	KDM4A	O75164	1064 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	ARIH2	O95376	493 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	MYL3	P08590	195 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	SUPT20HL2	P0C7V6	817 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	CPT1A	P50416	773 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PDE4D	Q08499	809 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	TTLL4	Q14679	1199 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	TSGA10IP	Q3SY00	556 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	TJAP1	Q5JTD0	557 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	CCDC62	Q6P9F0	684 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	STOX1	Q6ZVD7	989 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	CHST3	Q7LGC8	479 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	SCFD2	Q8WU76	684 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PPM1E	Q8WY54	764 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	SYMPK	Q92797	1274 aa	Known RBP	12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	GAS2L1	Q99501	681 aa	Predicted RBP	12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	MTIF3	Q9H2K0	278 aa	Known RBP	12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	ZSWIM5	Q9P217	1185 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	SLC4A7	Q9Y6M7	1214 aa		12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PRRC2B	Q5JSZ5	2229 aa	Known RBP	12.45	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	NKRF	O15226	690 aa	Known RBP eCLIP	12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PSMA5	P28066	241 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	ADCK5	Q3MIX3	580 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	GPATCH4	Q5T3I0	446 aa	Known RBP	12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	NFRKB	Q6P4R8	1299 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	KCNB2	Q92953	911 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	SLC28A3	Q9HAS3	691 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PCDHA11	Q9Y5I1	949 aa		12.44	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	KPNA6	O60684	536 aa		12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	HMGB1	P09429	215 aa	Known RBP	12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	TXN	P10599	105 aa	Known RBP	12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	CPA1	P15085	419 aa		12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	CAST	P20810	708 aa	Known RBP	12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	MCM5	P33992	734 aa		12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	ANAPC15	P60006	121 aa		12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	FGD1	P98174	961 aa		12.43	□□□□□ -0.42
PDE4DIP-231	ENST00000533259	PPP2R5B	Q15173	497 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms