RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 RMDN3Q96TC7 470 aa27.25■■□□□ 1.95
SMPD1-209ENST00000533196 MAP3K14Q99558 947 aa27.25■■□□□ 1.95
SMPD1-209ENST00000533196 KPNA6O60684 536 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 PTGS1P23219 599 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 HSD17B4P51659 736 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 ANTXR2P58335 489 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 COL20A1Q9P218 1284 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 PCDHA1Q9Y5I3 950 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 SCN10AQ9Y5Y9 1956 aa27.24■■□□□ 1.95
SMPD1-209ENST00000533196 TXNP10599 105 aaKnown RBP27.23■■□□□ 1.95
SMPD1-209ENST00000533196 PPIGQ13427 754 aaKnown RBP eCLIP27.23■■□□□ 1.95
SMPD1-209ENST00000533196 STXBP2Q15833 593 aa27.23■■□□□ 1.95
SMPD1-209ENST00000533196 CHST3Q7LGC8 479 aa27.23■■□□□ 1.95
SMPD1-209ENST00000533196 TMEM199Q8N511 208 aa27.23■■□□□ 1.95
SMPD1-209ENST00000533196 SENP2Q9HC62 589 aa27.23■■□□□ 1.95
SMPD1-209ENST00000533196 GRIN2DO15399 1336 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 A6NJR5 290 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 CFBP00751 764 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 PURAQ00577 322 aaKnown RBP27.22■■□□□ 1.95
SMPD1-209ENST00000533196 ARHGEF16Q5VV41 709 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 CASC1Q6TDU7 716 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 TMTC2Q8N394 836 aa27.22■■□□□ 1.95
SMPD1-209ENST00000533196 GPHNQ9NQX3 736 aaPredicted RBP27.22■■□□□ 1.95
SMPD1-209ENST00000533196 PPP1R11O60927 126 aaPredicted RBP27.21■■□□□ 1.95
SMPD1-209ENST00000533196 DDAH1O94760 285 aa27.21■■□□□ 1.95
SMPD1-209ENST00000533196 MCM5P33992 734 aa27.21■■□□□ 1.95
SMPD1-209ENST00000533196 SMAD3P84022 425 aaKnown RBP27.21■■□□□ 1.95
SMPD1-209ENST00000533196 CCDC62Q6P9F0 684 aa27.21■■□□□ 1.95
SMPD1-209ENST00000533196 TMEM87BQ96K49 555 aa27.21■■□□□ 1.95
SMPD1-209ENST00000533196 MTG1Q9BT17 334 aaPredicted RBP27.21■■□□□ 1.95
SMPD1-209ENST00000533196 MTMR10Q9NXD2 777 aa27.21■■□□□ 1.95
SMPD1-209ENST00000533196 PNMA6FA0A0J9YX94 578 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 OPLAHO14841 1288 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 EIF3JO75822 258 aaKnown RBP27.2■■□□□ 1.94
SMPD1-209ENST00000533196 SMARCA1P28370 1054 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 EPHB4P54760 987 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 NECTIN1Q15223 517 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 HOMER1Q86YM7 354 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 RNPC3Q96LT9 517 aaKnown RBP27.2■■□□□ 1.94
SMPD1-209ENST00000533196 PIGSQ96S52 555 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 LY9Q9HBG7 655 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 PXMP2Q9NR77 195 aa27.2■■□□□ 1.94
SMPD1-209ENST00000533196 SLC27A2O14975 620 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 CYTH3O43739 400 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 NR3C2P08235 984 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 MYL3P08590 195 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 KIF5BP33176 963 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 PSMC6P62333 389 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 SLC35G1Q2M3R5 365 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 Q7L0L9 218 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 CTCFLQ8NI51 663 aaPredicted RBP27.19■■□□□ 1.94
SMPD1-209ENST00000533196 ANO2Q9NQ90 1003 aa27.19■■□□□ 1.94
SMPD1-209ENST00000533196 PRC1O43663 620 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 ARIH2O95376 493 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 GH1P01241 217 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 SUPT20HL2P0C7V6 817 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 CREB3L3Q68CJ9 461 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 ZNF654Q8IZM8 581 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 LZTS2Q9BRK4 669 aa27.18■■□□□ 1.94
SMPD1-209ENST00000533196 EIF2AK2P19525 551 aaKnown RBP27.17■■□□□ 1.94
SMPD1-209ENST00000533196 LIFRP42702 1097 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 GNAQP50148 359 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 ZNF697Q5TEC3 545 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 RNF20Q5VTR2 975 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 SEPT14Q6ZU15 432 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 COPS5Q92905 334 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 SPZ1Q9BXG8 430 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 PPP1R12CQ9BZL4 782 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 ALDH8A1Q9H2A2 487 aaPredicted RBP27.17■■□□□ 1.94
SMPD1-209ENST00000533196 HIPK3Q9H422 1215 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 STXBP5LQ9Y2K9 1186 aa27.17■■□□□ 1.94
SMPD1-209ENST00000533196 GCOM1H8Y6P7 765 aaPredicted RBP27.16■■□□□ 1.94
SMPD1-209ENST00000533196 SH2B2O14492 632 aaPredicted RBP27.16■■□□□ 1.94
SMPD1-209ENST00000533196 B4GALT4O60513 344 aa27.16■■□□□ 1.94
SMPD1-209ENST00000533196 POLR2MP0CAP2 368 aa27.16■■□□□ 1.94
SMPD1-209ENST00000533196 PTPN11Q06124 597 aaPredicted RBP27.16■■□□□ 1.94
SMPD1-209ENST00000533196 NFRKBQ6P4R8 1299 aa27.16■■□□□ 1.94
SMPD1-209ENST00000533196 PSRC1Q6PGN9 363 aaPredicted RBP27.16■■□□□ 1.94
SMPD1-209ENST00000533196 PDCD2LQ9BRP1 358 aa27.16■■□□□ 1.94
SMPD1-209ENST00000533196 CALM1P0DP23 149 aa27.15■■□□□ 1.94
SMPD1-209ENST00000533196 CALM2P0DP24 149 aa27.15■■□□□ 1.94
SMPD1-209ENST00000533196 CALM3P0DP25 149 aa27.15■■□□□ 1.94
SMPD1-209ENST00000533196 KCNV1Q6PIU1 500 aa27.15■■□□□ 1.94
SMPD1-209ENST00000533196 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.15■■□□□ 1.94
SMPD1-209ENST00000533196 NOC4LQ9BVI4 516 aaKnown RBP27.15■■□□□ 1.94
SMPD1-209ENST00000533196 TRPV6Q9H1D0 765 aa27.15■■□□□ 1.94
SMPD1-209ENST00000533196 MYH7BA7E2Y1 1941 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 TMEM265A0A087WTH1 108 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.14■■□□□ 1.94
SMPD1-209ENST00000533196 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.14■■□□□ 1.94
SMPD1-209ENST00000533196 CCDC69A6NI79 296 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 CSF2RAP15509 400 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 ARHGAP1Q07960 439 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 NFXL1Q6ZNB6 911 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 EMID1Q96A84 441 aaPredicted RBP27.14■■□□□ 1.94
SMPD1-209ENST00000533196 IL23AQ9NPF7 189 aa27.14■■□□□ 1.94
SMPD1-209ENST00000533196 DDX41Q9UJV9 622 aaKnown RBP27.14■■□□□ 1.94
SMPD1-209ENST00000533196 CYP2C18P33260 490 aa27.13■■□□□ 1.93
SMPD1-209ENST00000533196 LY6KQ17RY6 165 aa27.13■■□□□ 1.93
SMPD1-209ENST00000533196 NBPF20Q3BBV1 942 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms