RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 COPS5Q92905 334 aa20.79■□□□□ 0.92
PCF11-206ENST00000533018 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
PCF11-206ENST00000533018 ALDH8A1Q9H2A2 487 aaPredicted RBP20.79■□□□□ 0.92
PCF11-206ENST00000533018 GRXCR1A8MXD5 290 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 FGBP02675 491 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 GSPT1P15170 499 aaKnown RBP20.78■□□□□ 0.92
PCF11-206ENST00000533018 EDNRBP24530 442 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 CHMP4BP1P59074 171 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 PURAQ00577 322 aaKnown RBP20.78■□□□□ 0.92
PCF11-206ENST00000533018 TTLL4Q14679 1199 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 RUFY2Q8WXA3 655 aa20.78■□□□□ 0.92
PCF11-206ENST00000533018 MTG1Q9BT17 334 aaPredicted RBP20.78■□□□□ 0.92
PCF11-206ENST00000533018 MTIF3Q9H2K0 278 aaKnown RBP20.78■□□□□ 0.92
PCF11-206ENST00000533018 TRMT13Q9NUP7 481 aaKnown RBP20.78■□□□□ 0.92
PCF11-206ENST00000533018 SUPT20HL2P0C7V6 817 aa20.77■□□□□ 0.92
PCF11-206ENST00000533018 NSUN6Q8TEA1 469 aaKnown RBP20.77■□□□□ 0.92
PCF11-206ENST00000533018 TAAR1Q96RJ0 339 aa20.77■□□□□ 0.92
PCF11-206ENST00000533018 NOC4LQ9BVI4 516 aaKnown RBP20.77■□□□□ 0.92
PCF11-206ENST00000533018 JMJD4Q9H9V9 463 aa20.77■□□□□ 0.92
PCF11-206ENST00000533018 MRPL11Q9Y3B7 192 aaKnown RBP20.77■□□□□ 0.92
PCF11-206ENST00000533018 GRIN2CQ14957 1233 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 ARHGEF16Q5VV41 709 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 SYTL5Q8TDW5 730 aaPredicted RBP20.76■□□□□ 0.91
PCF11-206ENST00000533018 RMDN3Q96TC7 470 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 ZNF576Q9H609 170 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 VCANP13611 3396 aa20.76■□□□□ 0.91
PCF11-206ENST00000533018 KLRF2D3W0D1 207 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 CFBP00751 764 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 CYP2C9P11712 490 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 PBX2P40425 430 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 STXBP2Q15833 593 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 NBPF20Q3BBV1 942 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 CYB5R4Q7L1T6 521 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 RPUSD2Q8IZ73 545 aaKnown RBP20.75■□□□□ 0.91
PCF11-206ENST00000533018 STAG2Q8N3U4 1231 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 PPP1R13LQ8WUF5 828 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 HERVK_113Q902F9 699 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 SCLYQ96I15 445 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 PBX4Q9BYU1 374 aa20.75■□□□□ 0.91
PCF11-206ENST00000533018 U3KPZ7 1027 aaPredicted RBP20.75■□□□□ 0.91
PCF11-206ENST00000533018 KIAA1217Q5T5P2 1943 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 ERICH2A1L162 156 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 A6NJR5 290 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 KPNA6O60684 536 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 ARIH2O95376 493 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 EIF2AK2P19525 551 aaKnown RBP20.74■□□□□ 0.91
PCF11-206ENST00000533018 LY6KQ17RY6 165 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 RASIP1Q5U651 963 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 CHST3Q7LGC8 479 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 AMNQ9BXJ7 453 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 MAF1Q9H063 256 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 WNT8AQ9H1J5 351 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 CXXC1Q9P0U4 656 aaPredicted RBP20.74■□□□□ 0.91
PCF11-206ENST00000533018 COL20A1Q9P218 1284 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 MSRAQ9UJ68 235 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 NOD1Q9Y239 953 aa20.74■□□□□ 0.91
PCF11-206ENST00000533018 BAZ2BQ9UIF8 2168 aaKnown RBP20.73■□□□□ 0.91
PCF11-206ENST00000533018 ZBBXA8MT70 800 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 IFIT3O14879 490 aaKnown RBP20.73■□□□□ 0.91
PCF11-206ENST00000533018 CHMLP26374 656 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 PTH1RQ03431 593 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 SEC23AQ15436 765 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 IWS1Q96ST2 819 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 SCN10AQ9Y5Y9 1956 aa20.73■□□□□ 0.91
PCF11-206ENST00000533018 CYP21A2P08686 494 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 NFRKBQ6P4R8 1299 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 DEFB128Q7Z7B8 93 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 RALYLQ86SE5 291 aaKnown RBP20.72■□□□□ 0.91
PCF11-206ENST00000533018 HOMER1Q86YM7 354 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 AFG1LQ8WV93 481 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 MAD2L2Q9UI95 211 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 GBF1Q92538 1859 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
PCF11-206ENST00000533018 GH1P01241 217 aa20.71■□□□□ 0.91
PCF11-206ENST00000533018 SART3Q15020 963 aaKnown RBP20.71■□□□□ 0.91
PCF11-206ENST00000533018 RAB30Q15771 203 aa20.71■□□□□ 0.91
PCF11-206ENST00000533018 GAS2L1Q99501 681 aaPredicted RBP20.71■□□□□ 0.91
PCF11-206ENST00000533018 SLC4A7Q9Y6M7 1214 aa20.71■□□□□ 0.91
PCF11-206ENST00000533018 SCN5AQ14524 2016 aa20.71■□□□□ 0.91
PCF11-206ENST00000533018 CHD9Q3L8U1 2897 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 ZBTB5O15062 677 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 EIF3JO75822 258 aaKnown RBP20.7■□□□□ 0.9
PCF11-206ENST00000533018 WTAPQ15007 396 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 CCDC62Q6P9F0 684 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 RETREG2Q8NC44 543 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 NCOA7Q8NI08 942 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 SLC28A3Q9HAS3 691 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
PCF11-206ENST00000533018 TRIP12Q14669 1992 aaPredicted RBP20.7■□□□□ 0.9
PCF11-206ENST00000533018 PALM3A6NDB9 673 aaPredicted RBP20.69■□□□□ 0.9
PCF11-206ENST00000533018 NR3C2P08235 984 aa20.69■□□□□ 0.9
PCF11-206ENST00000533018 MMP3P08254 477 aa20.69■□□□□ 0.9
PCF11-206ENST00000533018 MYCLP12524 364 aaPredicted RBP20.69■□□□□ 0.9
PCF11-206ENST00000533018 COL25A1Q9BXS0 654 aaPredicted RBP20.69■□□□□ 0.9
PCF11-206ENST00000533018 NKX2-4Q9H2Z4 354 aa20.69■□□□□ 0.9
PCF11-206ENST00000533018 PRDM12Q9H4Q4 367 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms