RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 TMEM63BQ5T3F8 832 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 TMTC3Q6ZXV5 915 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 PCSK9Q8NBP7 692 aaKnown RBP17.78■□□□□ 0.44
CPSF1-210ENST00000532935 IWS1Q96ST2 819 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 WDR11Q9BZH6 1224 aa17.78■□□□□ 0.44
CPSF1-210ENST00000532935 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 EIF2AK2P19525 551 aaKnown RBP17.77■□□□□ 0.44
CPSF1-210ENST00000532935 PTGS1P23219 599 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 RPS6KB1P23443 525 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 PSMA5P28066 241 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-210ENST00000532935 DUSP28Q4G0W2 176 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 ARHGEF16Q5VV41 709 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 Q6ZUG5 572 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 AP5M1Q9H0R1 490 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 PXMP2Q9NR77 195 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
CPSF1-210ENST00000532935 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 Q9Y3F1 56 aa17.77■□□□□ 0.44
CPSF1-210ENST00000532935 LTBP2Q14767 1821 aa17.77■□□□□ 0.43
CPSF1-210ENST00000532935 GCOM1H8Y6P7 765 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-210ENST00000532935 DYNC1LI2O43237 492 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-210ENST00000532935 ASGR1P07306 291 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 POLR2MP0CAP2 368 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 SYN1P17600 705 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
CPSF1-210ENST00000532935 BEX3Q00994 111 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 RTN1Q16799 776 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 C1orf53Q5VUE5 145 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 CHRDL2Q6WN34 429 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 CCDC82Q8N4S0 544 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 SCFD2Q8WU76 684 aa17.76■□□□□ 0.43
CPSF1-210ENST00000532935 COLQQ9Y215 455 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-210ENST00000532935 TRIOBPQ9H2D6 2365 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 GOLGA8AA7E2F4 631 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 GOLGA8BA8MQT2 603 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 RCAN1P53805 252 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 APOBRQ0VD83 1088 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 PPP2R5BQ15173 497 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 STXBP2Q15833 593 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 FSCN1Q16658 493 aaKnown RBP17.75■□□□□ 0.43
CPSF1-210ENST00000532935 STARD7Q9NQZ5 370 aa17.75■□□□□ 0.43
CPSF1-210ENST00000532935 NAP1L2Q9ULW6 460 aaPredicted RBP17.75■□□□□ 0.43
CPSF1-210ENST00000532935 CNTNAP5Q8WYK1 1306 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 hCG_1642624A0A1W2PR95 340 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 NR3C2P08235 984 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 FCHSD1Q86WN1 690 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 FBXL16Q8N461 479 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 BRF1Q92994 677 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 GLT1D1Q96MS3 346 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 PDCD2LQ9BRP1 358 aa17.74■□□□□ 0.43
CPSF1-210ENST00000532935 ELP1O95163 1332 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
CPSF1-210ENST00000532935 ZEB2O60315 1214 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 EIF3JO75822 258 aaKnown RBP17.73■□□□□ 0.43
CPSF1-210ENST00000532935 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
CPSF1-210ENST00000532935 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.435e-7■□□□□ 9.3
CPSF1-210ENST00000532935 FUT2Q10981 343 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 TTLL4Q14679 1199 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 SEPT14Q6ZU15 432 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 RUFY3Q7L099 469 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 OR6J1Q8NGC5 347 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 VTI1AQ96AJ9 217 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 AGXT2Q9BYV1 514 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 PRO3102Q9H379 93 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 ZSWIM6Q9HCJ5 1215 aa17.73■□□□□ 0.43
CPSF1-210ENST00000532935 FAM217BQ9NTX9 383 aaPredicted RBP17.73■□□□□ 0.43
CPSF1-210ENST00000532935 NID2Q14112 1375 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 ARIH2O95376 493 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 CDC27P30260 824 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 TLE2Q04725 743 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 PGM5Q15124 567 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
CPSF1-210ENST00000532935 CCDC62Q6P9F0 684 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 CXCL17Q6UXB2 119 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 COPS5Q92905 334 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 CUL5Q93034 780 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 TM6SF1Q9BZW5 370 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 PCDH10Q9P2E7 1040 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 RBM27Q9P2N5 1060 aaKnown RBP17.72■□□□□ 0.43
CPSF1-210ENST00000532935 CYP46A1Q9Y6A2 500 aa17.72■□□□□ 0.43
CPSF1-210ENST00000532935 PIK3CDO00329 1044 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 PQBP1O60828 265 aaKnown RBP17.71■□□□□ 0.43
CPSF1-210ENST00000532935 CABYRO75952 493 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 MYCLP12524 364 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-210ENST00000532935 MAGEA10P43363 369 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-210ENST00000532935 CPT1AP50416 773 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 USP17L6PQ6QN14 398 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 HEATR3Q7Z4Q2 680 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 VSIG10LQ86VR7 867 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 IL31RAQ8NI17 732 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 GPKOWQ92917 476 aaPredicted RBP eCLIP17.71■□□□□ 0.43
CPSF1-210ENST00000532935 GDF15Q99988 308 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 PDLIM7Q9NR12 457 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 PRKAG2Q9UGJ0 569 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 DOCK5Q9H7D0 1870 aa17.71■□□□□ 0.43
CPSF1-210ENST00000532935 FRMPD4Q14CM0 1322 aa17.71■□□□□ 0.42
CPSF1-210ENST00000532935 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms