RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 PIK3CDO00329 1044 aa28.55■■■□□ 2.16
USP48-214ENST00000532737 GJB1P08034 283 aa28.55■■■□□ 2.16
USP48-214ENST00000532737 ZNF865P0CJ78 1059 aaPredicted RBP28.55■■■□□ 2.16
USP48-214ENST00000532737 NSUN6Q8TEA1 469 aaKnown RBP28.55■■■□□ 2.16
USP48-214ENST00000532737 DEFB118Q96PH6 123 aa28.55■■■□□ 2.16
USP48-214ENST00000532737 KATNBL1Q9H079 304 aa28.55■■■□□ 2.16
USP48-214ENST00000532737 LOC102724159A0A0B4J2E5 919 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 DEXIO95424 95 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 EDNRBP24530 442 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 CNGA1P29973 690 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 ACVR2BQ13705 512 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 PWP2Q15269 919 aaKnown RBP28.54■■■□□ 2.16
USP48-214ENST00000532737 CUL5Q93034 780 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 SHISA4Q96DD7 197 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 ABHD16BQ9H3Z7 469 aa28.54■■■□□ 2.16
USP48-214ENST00000532737 SMCO2A6NFE2 343 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 EIF2AK2P19525 551 aaKnown RBP28.53■■■□□ 2.16
USP48-214ENST00000532737 UBE2SQ16763 222 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 ARHGEF16Q5VV41 709 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 CCDC83Q8IWF9 413 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 SMARCC2Q8TAQ2 1214 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 RIC8AQ9NPQ8 531 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 PXMP2Q9NR77 195 aa28.53■■■□□ 2.16
USP48-214ENST00000532737 ZHX1Q9UKY1 873 aaPredicted RBP28.53■■■□□ 2.16
USP48-214ENST00000532737 STK36Q9NRP7 1315 aa28.52■■■□□ 2.16
USP48-214ENST00000532737 ADCY7P51828 1080 aa28.52■■■□□ 2.16
USP48-214ENST00000532737 EEPD1Q7L9B9 569 aa28.52■■■□□ 2.16
USP48-214ENST00000532737 NSUN7Q8NE18 718 aaKnown RBP28.52■■■□□ 2.16
USP48-214ENST00000532737 AIFM3Q96NN9 605 aa28.52■■■□□ 2.16
USP48-214ENST00000532737 SH2B1Q9NRF2 756 aaPredicted RBP28.52■■■□□ 2.16
USP48-214ENST00000532737 VPS54Q9P1Q0 977 aa28.52■■■□□ 2.16
USP48-214ENST00000532737 SEPT4O43236 478 aa28.51■■■□□ 2.15
USP48-214ENST00000532737 JAK2O60674 1132 aa28.51■■■□□ 2.15
USP48-214ENST00000532737 MRPL12P52815 198 aaKnown RBP28.51■■■□□ 2.15
USP48-214ENST00000532737 PDE4DQ08499 809 aa28.51■■■□□ 2.15
USP48-214ENST00000532737 LHX8Q68G74 356 aa28.51■■■□□ 2.15
USP48-214ENST00000532737 U2AF1L4Q8WU68 220 aaKnown RBP28.51■■■□□ 2.15
USP48-214ENST00000532737 IWS1Q96ST2 819 aa28.51■■■□□ 2.15
USP48-214ENST00000532737 ESYT2A0FGR8 921 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 ADAMTS3O15072 1205 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 SGPL1O95470 568 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 NR3C2P08235 984 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 FDPSP14324 419 aaKnown RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 GJA8P48165 433 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 HABP4Q5JVS0 413 aaKnown RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 FBXO16Q8IX29 292 aaPredicted RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 MPHOSPH6Q99547 160 aaKnown RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 PDCD2LQ9BRP1 358 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 ZMYND12Q9H0C1 365 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 ORC3Q9UBD5 711 aaPredicted RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 DDX20Q9UHI6 824 aaKnown RBP28.5■■■□□ 2.15
USP48-214ENST00000532737 MCM3APO60318 1980 aa28.5■■■□□ 2.15
USP48-214ENST00000532737 B4DLN1 442 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 ANO1Q5XXA6 986 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 IL31RAQ8NI17 732 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 CCDC12Q8WUD4 166 aaPredicted RBP28.49■■■□□ 2.15
USP48-214ENST00000532737 CRISPLD2Q9H0B8 497 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 VTA1Q9NP79 307 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 SH3GLB2Q9NR46 395 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 PDGFCQ9NRA1 345 aa28.49■■■□□ 2.15
USP48-214ENST00000532737 MCM2P49736 904 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 PGM5Q15124 567 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 CCDC144BQ3MJ40 725 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 TAPT1Q6NXT6 567 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 TMX3Q96JJ7 454 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 FAM184BQ9ULE4 1060 aa28.48■■■□□ 2.15
USP48-214ENST00000532737 FRMPD4Q14CM0 1322 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 TEX2Q8IWB9 1127 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 CCDC148Q8NFR7 591 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 GLT8D2Q9H1C3 349 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 C6orf50Q9HD87 102 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 TMEM260Q9NX78 707 aa28.47■■■□□ 2.15
USP48-214ENST00000532737 MSCO60682 206 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 MYCLP12524 364 aaPredicted RBP28.46■■■□□ 2.15
USP48-214ENST00000532737 AKR1A1P14550 325 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 ADCYAP1R1P41586 468 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 STXBP2Q15833 593 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 VSIG10LQ86VR7 867 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 LLPHQ9BRT6 129 aaKnown RBP28.46■■■□□ 2.15
USP48-214ENST00000532737 PCDHA6Q9UN73 950 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 PCDHA8Q9Y5H6 950 aa28.46■■■□□ 2.15
USP48-214ENST00000532737 SPDYE3A6NKU9 549 aa28.45■■■□□ 2.14
USP48-214ENST00000532737 ADCY6O43306 1168 aa28.45■■■□□ 2.14
USP48-214ENST00000532737 TFRCP02786 760 aaKnown RBP28.45■■■□□ 2.14
USP48-214ENST00000532737 CLK2P49760 499 aaKnown RBP28.45■■■□□ 2.14
USP48-214ENST00000532737 NLRP5P59047 1200 aa28.45■■■□□ 2.14
USP48-214ENST00000532737 LENG1Q96BZ8 264 aaPredicted RBP28.45■■■□□ 2.14
USP48-214ENST00000532737 ZFP91Q96JP5 570 aaPredicted RBP28.45■■■□□ 2.14
USP48-214ENST00000532737 GJB4Q9NTQ9 266 aa28.45■■■□□ 2.14
USP48-214ENST00000532737 OGDHLQ9ULD0 1010 aa28.45■■■□□ 2.14
USP48-214ENST00000532737 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.44■■■□□ 2.14
USP48-214ENST00000532737 EIF3JO75822 258 aaKnown RBP28.44■■■□□ 2.14
USP48-214ENST00000532737 GNA11P29992 359 aa28.44■■■□□ 2.14
USP48-214ENST00000532737 TMEM63BQ5T3F8 832 aa28.44■■■□□ 2.14
USP48-214ENST00000532737 PGBD1Q96JS3 809 aa28.44■■■□□ 2.14
USP48-214ENST00000532737 ALG1Q9BT22 464 aa28.44■■■□□ 2.14
USP48-214ENST00000532737 RBM47A0AV96 593 aaKnown RBP28.43■■■□□ 2.14
USP48-214ENST00000532737 JAKMIP3Q5VZ66 844 aa28.43■■■□□ 2.14
USP48-214ENST00000532737 IQSEC1Q6DN90 963 aa28.43■■■□□ 2.14
USP48-214ENST00000532737 WASF1Q92558 559 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms