RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NPR1P16066 1061 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 SLC44A5Q8NCS7 719 aa16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 ARHGEF1Q92888 912 aaKnown RBP16.85■□□□□ 0.29
PCDHA3-202ENST00000532566 ORC4O43929 436 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 HOXA7P31268 230 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 ODR4Q5SWX8 454 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 PPP1R14CQ8TAE6 165 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 GDAQ9Y2T3 454 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 ADRA2BP18089 450 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 PRKG1Q13976 671 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 XKR9Q5GH70 373 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 ACRBPQ8NEB7 543 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 MNAT1P51948 309 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 NKX1-1Q15270 411 aaPredicted RBP16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 UBE2SQ16763 222 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 CCDC144BQ3MJ40 725 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 TCP11X2Q5H9J9 407 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 DCAF15Q66K64 600 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 MICALL1Q8N3F8 863 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 AS3MTQ9HBK9 375 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 CUL4BQ13620 913 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 SEPT2Q15019 361 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 IGDCC4Q8TDY8 1250 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 KCNK9Q9NPC2 374 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 MYOM1P52179 1685 aa16.84■□□□□ 0.29
PCDHA3-202ENST00000532566 CASP1P29466 404 aa16.83■□□□□ 0.29
PCDHA3-202ENST00000532566 PSMD2Q13200 908 aa16.83■□□□□ 0.29
PCDHA3-202ENST00000532566 ENC1O14682 589 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 TNNI1P19237 187 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 FAM102BQ5T8I3 360 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 PAXIP1Q6ZW49 1069 aaPredicted RBP16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 KCNB2Q92953 911 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 ASIC3Q9UHC3 531 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 MFAP3LO75121 409 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 FOXP4Q8IVH2 680 aaPredicted RBP16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 BZW2Q9Y6E2 419 aaKnown RBP16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 MROH7-TTC4A0A0A0MT08 1334 aa16.83■□□□□ 0.28
PCDHA3-202ENST00000532566 SF3B3Q15393 1217 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CDAN1Q8IWY9 1227 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 WDR11Q9BZH6 1224 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 NDUFA10O95299 355 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 GAP43P17677 238 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CCDC170Q8IYT3 715 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 ATP2A2P16615 1042 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 ANTXR2P58335 489 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 RASSF7Q02833 373 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 MTMR3Q13615 1198 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 GRM4Q14833 912 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 ARMCX5Q6P1M9 558 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CROCCP2Q86T23 111 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 SAMD15Q9P1V8 674 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 GUCY1A2P33402 732 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CDC37Q16543 378 aaPredicted RBP16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 CCDC105Q8IYK2 499 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 RAB17Q9H0T7 212 aa16.82■□□□□ 0.28
PCDHA3-202ENST00000532566 LRRC63Q05C16 580 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 LONRF2Q1L5Z9 754 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 DHX40Q8IX18 779 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 NSUN4Q96CB9 384 aaKnown RBP16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 AGTPBP1Q9UPW5 1226 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 MMP10P09238 476 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 ATP5DP30049 168 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 PPP2R5EQ16537 467 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 CEP128Q6ZU80 1094 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 B4GALNT4Q76KP1 1039 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 PLEKHA4Q9H4M7 779 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 EMILIN3Q9NT22 766 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 STAT2P52630 851 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 DCUN1D2Q6PH85 259 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 DEPTORQ8TB45 409 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 SMCR8Q8TEV9 937 aaPredicted RBP16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 NDST4Q9H3R1 872 aa16.81■□□□□ 0.28
PCDHA3-202ENST00000532566 USP17L5A8MUK1 530 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 PLA2G4BP0C869 781 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 ZNF577Q9BSK1 485 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 ANO3Q9BYT9 981 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 NKIRAS1Q9NYS0 192 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 KRIT1O00522 736 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 ATP8B1O43520 1251 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 UBXN2AP68543 259 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 IRX3P78415 501 aaPredicted RBP16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 C10orf67Q8IYJ2 551 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 MB21D1Q8N884 522 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 AFPP02771 609 aaKnown RBP16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 EHHADHQ08426 723 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 IQCB1Q15051 598 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 PPM1KQ8N3J5 372 aa16.8■□□□□ 0.28
PCDHA3-202ENST00000532566 MAK16Q9BXY0 300 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms