RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CTGFP29279 349 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 PRMT2P55345 433 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 CAP1Q01518 475 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 KLRC3Q07444 240 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 DSC3Q14574 896 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 COG2Q14746 738 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 KIAA1755Q5JYT7 1200 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 AKNAD1Q5T1N1 836 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 IFFO2Q5TF58 517 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 CASC1Q6TDU7 716 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 KIAA1211Q6ZU35 1233 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 FILIP1Q7Z7B0 1213 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 TBC1D10CQ8IV04 446 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 CKAP2LQ8IYA6 745 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 STAG1Q8WVM7 1258 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 ESR2Q92731 530 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 MKL1Q969V6 931 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 VTI1AQ96AJ9 217 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 TRIM47Q96LD4 638 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 IL25Q9H293 177 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 TXNRD2Q9NNW7 524 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 HOXC10Q9NYD6 342 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 RBPJLQ9UBG7 517 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 MORF4L1Q9UBU8 362 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 SYNPO2Q9UMS6 1093 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 STX8Q9UNK0 236 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 KIAA1024Q9UPX6 916 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 FAN1Q9Y2M0 1017 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 PRKAB1Q9Y478 270 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 PLIN4Q96Q06 1357 aa6.79□□□□□ -1.32
HMGB1P42-201ENST00000532126 ATAD5Q96QE3 1844 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 BAZ2AQ9UIF9 1905 aaKnown RBP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 ENPP3O14638 875 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 SGSM2O43147 1006 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 NMT2O60551 498 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 PEX10O60683 326 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 NDUFB10O96000 172 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 CCNYL3P0C7X3 344 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 NT5C2P49902 561 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 FAM83BQ5T0W9 1011 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 SLFN13Q68D06 897 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 LBX2Q6XYB7 198 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 LRRC47Q8N1G4 583 aaKnown RBP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 GMCL1P1Q8NEA9 526 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 RAET1EQ8TD07 263 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 COA7Q96BR5 231 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 THAP11Q96EK4 314 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 CRELD1Q96HD1 420 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 SLKQ9H2G2 1235 aaPredicted RBP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 SPC25Q9HBM1 224 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 PCDH12Q9NPG4 1184 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 IL17RBQ9NRM6 502 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 SRRDQ9UH36 339 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 DMGDHQ9UI17 866 aaKnown RBP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 RABGAP1Q9Y3P9 1069 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 TACC3Q9Y6A5 838 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 PTCH2Q9Y6C5 1203 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 MRPL42Q9Y6G3 142 aaKnown RBP6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 CASP8AP2Q9UKL3 1982 aa6.78□□□□□ -1.32
HMGB1P42-201ENST00000532126 NEDD4P46934 1319 aa6.77□□□□□ -1.32
HMGB1P42-201ENST00000532126 MYPNQ86TC9 1320 aa6.77□□□□□ -1.32
HMGB1P42-201ENST00000532126 TK2O00142 265 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 CDC45O75419 566 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 MAPK4P31152 587 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC1A4P43007 532 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 FLT3LGP49771 235 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ERVK-9P63128 1117 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ERVK-24P63145 666 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 CCNA1P78396 465 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 PTH1RQ03431 593 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 PRKCZQ05513 592 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 SLC9C1Q4G0N8 1177 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 OXLD1Q5BKU9 147 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 NBPF11Q86T75 865 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 IQCA1Q86XH1 822 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 MB21D1Q8N884 522 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 MAP4K1Q92918 833 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ALKBH8Q96BT7 664 aaKnown RBP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 NUP88Q99567 741 aaPredicted RBP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ESYT1Q9BSJ8 1104 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 KRT23Q9C075 422 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 CNNM2Q9H8M5 875 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 TCP11L1Q9NUJ3 509 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 FBXO28Q9NVF7 368 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 EVA1BQ9NVM1 165 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 BTBD7Q9P203 1132 aa6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 ISY1Q9ULR0 285 aaKnown RBP6.77□□□□□ -1.33
HMGB1P42-201ENST00000532126 PTPRFP10586 1907 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 POTEMA6NI47 508 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 GOLGA8CPA6NN73 597 aa6.76□□□□□ -1.33
HMGB1P42-201ENST00000532126 B4E1Z4 1266 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms