RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 PTPDC1A2A3K4 754 aa23.43■■□□□ 1.34
HIPK3-205ENST00000531504 A6NJR5 290 aa23.43■■□□□ 1.34
HIPK3-205ENST00000531504 PARNO95453 639 aaKnown RBP23.43■■□□□ 1.34
HIPK3-205ENST00000531504 SPRED2Q7Z698 418 aa23.43■■□□□ 1.34
HIPK3-205ENST00000531504 SCFD2Q8WU76 684 aa23.43■■□□□ 1.34
HIPK3-205ENST00000531504 NAPBQ9H115 298 aa23.43■■□□□ 1.34
HIPK3-205ENST00000531504 LCHNA4D1U4 455 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 TSPY2A6NKD2 308 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 M0R2C6 588 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 ALADP13716 330 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 SSTR3P32745 418 aaPredicted RBP23.42■■□□□ 1.34
HIPK3-205ENST00000531504 PPARAQ07869 468 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 PDE4DQ08499 809 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 PTGISQ16647 500 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 CSPP1Q1MSJ5 1256 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 CCDC96Q2M329 555 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 LEXMQ3ZCV2 418 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 FAM178BQ8IXR5 827 aa23.42■■□□□ 1.34
HIPK3-205ENST00000531504 TGS1Q96RS0 853 aaKnown RBP23.42■■□□□ 1.34
HIPK3-205ENST00000531504 RANBP17Q9H2T7 1088 aaKnown RBP23.42■■□□□ 1.34
HIPK3-205ENST00000531504 CNKSR3Q6P9H4 555 aa23.41■■□□□ 1.34
HIPK3-205ENST00000531504 PNMA2Q9UL42 364 aa23.41■■□□□ 1.34
HIPK3-205ENST00000531504 MTUS1Q9ULD2 1270 aa23.41■■□□□ 1.34
HIPK3-205ENST00000531504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.4■■□□□ 1.34
HIPK3-205ENST00000531504 B4DLN1 442 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 NFIBO00712 420 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 SELPP16109 830 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 KCNA5P22460 613 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 CALML3P27482 149 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 MRPL12P52815 198 aaKnown RBP23.4■■□□□ 1.34
HIPK3-205ENST00000531504 CHMP4BP1P59074 171 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 ERVK-21P61565 698 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 PPP1R13LQ8WUF5 828 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 DCAF4Q8WV16 495 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 UIMC1Q96RL1 719 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 CRBNQ96SW2 442 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 RAD9AQ99638 391 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 SUGCTQ9HAC7 445 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 MTMR7Q9Y216 660 aa23.4■■□□□ 1.34
HIPK3-205ENST00000531504 EFCAB14O75071 495 aa23.39■■□□□ 1.33
HIPK3-205ENST00000531504 GJB5O95377 273 aa23.39■■□□□ 1.33
HIPK3-205ENST00000531504 RNF207Q6ZRF8 634 aa23.39■■□□□ 1.33
HIPK3-205ENST00000531504 LRRC8DQ7L1W4 858 aa23.39■■□□□ 1.33
HIPK3-205ENST00000531504 ABHD14A-ACY1A0A1B0GW23 586 aa23.38■■□□□ 1.33
HIPK3-205ENST00000531504 SMARCA5O60264 1052 aaPredicted RBP23.38■■□□□ 1.33
HIPK3-205ENST00000531504 TXNP10599 105 aaKnown RBP23.38■■□□□ 1.33
HIPK3-205ENST00000531504 DEFB103AP81534 67 aa23.38■■□□□ 1.33
HIPK3-205ENST00000531504 PUS10Q3MIT2 529 aaKnown RBP23.38■■□□□ 1.33
HIPK3-205ENST00000531504 SLC30A10Q6XR72 485 aa23.38■■□□□ 1.33
HIPK3-205ENST00000531504 RASGRP2Q7LDG7 609 aa23.38■■□□□ 1.33
HIPK3-205ENST00000531504 TMCO2Q7Z6W1 182 aaPredicted RBP23.38■■□□□ 1.33
HIPK3-205ENST00000531504 DNERQ8NFT8 737 aa23.38■■□□□ 1.33
HIPK3-205ENST00000531504 MRE11P49959 708 aa23.37■■□□□ 1.33
HIPK3-205ENST00000531504 SYDE2Q5VT97 1194 aa23.37■■□□□ 1.33
HIPK3-205ENST00000531504 PTCRAQ6ISU1 281 aaPredicted RBP23.37■■□□□ 1.33
HIPK3-205ENST00000531504 SESTD1Q86VW0 696 aa23.37■■□□□ 1.33
HIPK3-205ENST00000531504 KCNH6Q9H252 994 aa23.37■■□□□ 1.33
HIPK3-205ENST00000531504 IL17RBQ9NRM6 502 aa23.37■■□□□ 1.33
HIPK3-205ENST00000531504 LINC01553A4QN01 128 aa23.36■■□□□ 1.33
HIPK3-205ENST00000531504 EDNRBP24530 442 aa23.36■■□□□ 1.33
HIPK3-205ENST00000531504 BTNL9Q6UXG8 535 aa23.36■■□□□ 1.33
HIPK3-205ENST00000531504 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.36■■□□□ 1.33
HIPK3-205ENST00000531504 COPS5Q92905 334 aa23.36■■□□□ 1.33
HIPK3-205ENST00000531504 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.36■■□□□ 1.33
HIPK3-205ENST00000531504 NMT2O60551 498 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 CXCL10P02778 98 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 IL9P15248 144 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 SLC16A2P36021 539 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 RBL2Q08999 1139 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 CTNNA3Q9UI47 895 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 RCAN3Q9UKA8 241 aa23.35■■□□□ 1.33
HIPK3-205ENST00000531504 RPS6P62753 249 aaKnown RBP23.34■■□□□ 1.33
HIPK3-205ENST00000531504 IKBKEQ14164 716 aa23.34■■□□□ 1.33
HIPK3-205ENST00000531504 TTBK2Q6IQ55 1244 aa23.34■■□□□ 1.33
HIPK3-205ENST00000531504 GDF6Q6KF10 455 aaPredicted RBP23.34■■□□□ 1.33
HIPK3-205ENST00000531504 FBXO22Q8NEZ5 403 aa23.34■■□□□ 1.33
HIPK3-205ENST00000531504 CLEC4DQ8WXI8 215 aa23.34■■□□□ 1.33
HIPK3-205ENST00000531504 FAM50BQ9Y247 325 aa23.34■■□□□ 1.33
HIPK3-205ENST00000531504 GRXCR2A6NFK2 248 aa23.33■■□□□ 1.33
HIPK3-205ENST00000531504 DCXO43602 365 aa23.33■■□□□ 1.33
HIPK3-205ENST00000531504 RANBP6O60518 1105 aaKnown RBP23.33■■□□□ 1.33
HIPK3-205ENST00000531504 MMP3P08254 477 aa23.33■■□□□ 1.33
HIPK3-205ENST00000531504 GPNMBQ14956 572 aa23.33■■□□□ 1.33
HIPK3-205ENST00000531504 NBNO60934 754 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 CKBP12277 381 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 NOVP48745 357 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 NHLH1Q02575 133 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 PTPROQ16827 1216 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 TSHZ3Q63HK5 1081 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 AFG1LQ8WV93 481 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 CTAGE1Q96RT6 745 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 SEC62Q99442 399 aaKnown RBP23.32■■□□□ 1.32
HIPK3-205ENST00000531504 INSL6Q9Y581 213 aa23.32■■□□□ 1.32
HIPK3-205ENST00000531504 GH1P01241 217 aa23.31■■□□□ 1.32
HIPK3-205ENST00000531504 CASTP20810 708 aaKnown RBP23.31■■□□□ 1.32
HIPK3-205ENST00000531504 CTDSPL2Q05D32 466 aa23.31■■□□□ 1.32
HIPK3-205ENST00000531504 TIGD5Q53EQ6 642 aa23.31■■□□□ 1.32
HIPK3-205ENST00000531504 FAM117BQ6P1L5 589 aa23.31■■□□□ 1.32
HIPK3-205ENST00000531504 C7orf31Q8N865 590 aa23.31■■□□□ 1.32
HIPK3-205ENST00000531504 DHX38Q92620 1227 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms