RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 TRAF1Q13077 416 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 RABEP1Q15276 862 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 UBE2SQ16763 222 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 IFFO2Q5TF58 517 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 IL31RAQ8NI17 732 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 ZFP91Q96JP5 570 aaPredicted RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 PSTPIP2Q9H939 334 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 DDX20Q9UHI6 824 aaKnown RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 CPLX1O14810 134 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 EIF2AK2P19525 551 aaKnown RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 NAPAP54920 295 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 CCDC144BQ3MJ40 725 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 TAPT1Q6NXT6 567 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 CCDC83Q8IWF9 413 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 MAF1Q9H063 256 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 PXMP2Q9NR77 195 aa13.44□□□□□ -0.26
ACER3-210ENST00000531352 MAP3K20Q9NYL2 800 aaKnown RBP13.44□□□□□ -0.26
ACER3-210ENST00000531352 CEP290O15078 2479 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 TFRCP02786 760 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 ADCYAP1R1P41586 468 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 MNX1P50219 401 aaPredicted RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 NSUN6Q8TEA1 469 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 OGDHLQ9ULD0 1010 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 LIMCH1Q9UPQ0 1083 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 LAMA2P24043 3122 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 PIK3CDO00329 1044 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 FDPSP14324 419 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 FOSBP53539 338 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 SSRP1Q08945 709 aaKnown RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
ACER3-210ENST00000531352 ARHGEF16Q5VV41 709 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 PDCD2LQ9BRP1 358 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 VPS54Q9P1Q0 977 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 NRBP1Q9UHY1 535 aa13.43□□□□□ -0.26
ACER3-210ENST00000531352 SMCO2A6NFE2 343 aa13.42□□□□□ -0.26
ACER3-210ENST00000531352 NR3C2P08235 984 aa13.42□□□□□ -0.26
ACER3-210ENST00000531352 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
ACER3-210ENST00000531352 PGBD1Q96JS3 809 aa13.42□□□□□ -0.26
ACER3-210ENST00000531352 MYH7BA7E2Y1 1941 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 RGS20O76081 388 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 AKR1A1P14550 325 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 PDE4DQ08499 809 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 PGM5Q15124 567 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 SAMD3Q8N6K7 520 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 NSUN7Q8NE18 718 aaKnown RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 SMARCC2Q8TAQ2 1214 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 DIS3LQ8TF46 1054 aaKnown RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 RIC8AQ9NPQ8 531 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 TMEM260Q9NX78 707 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 LOC102724159A0A0B4J2E5 919 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 DEXIO95424 95 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 PGK1P00558 417 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 MYCLP12524 364 aaPredicted RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 SMPD1P17405 629 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 RGS19P49795 217 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 MRPS9P82933 396 aaKnown RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 PWP2Q15269 919 aaKnown RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 UBE2Q1Q7Z7E8 422 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 VSIG10LQ86VR7 867 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 TRIM22Q8IYM9 498 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 CUL5Q93034 780 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 TMX3Q96JJ7 454 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 IWS1Q96ST2 819 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 RBM27Q9P2N5 1060 aaKnown RBP13.41□□□□□ -0.26
ACER3-210ENST00000531352 FAM184BQ9ULE4 1060 aa13.41□□□□□ -0.26
ACER3-210ENST00000531352 FRMPD4Q14CM0 1322 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 hCG_1984214I3L0E3 225 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 ARIH2O95376 493 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 CLK2P49760 499 aaKnown RBP13.4□□□□□ -0.26
ACER3-210ENST00000531352 PPP1R18Q6NYC8 613 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
ACER3-210ENST00000531352 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
ACER3-210ENST00000531352 RASGRP4Q8TDF6 673 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 VTA1Q9NP79 307 aa13.4□□□□□ -0.26
ACER3-210ENST00000531352 MSCO60682 206 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 ADCY7P51828 1080 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 TNFAIP2Q03169 654 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 NPY5RQ15761 445 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 STXBP2Q15833 593 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 SEPT14Q6ZU15 432 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 PAWRQ96IZ0 340 aaKnown RBP13.4□□□□□ -0.27
ACER3-210ENST00000531352 ORC3Q9UBD5 711 aaPredicted RBP13.4□□□□□ -0.27
ACER3-210ENST00000531352 PCDHA6Q9UN73 950 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 GNEQ9Y223 722 aaKnown RBP13.4□□□□□ -0.27
ACER3-210ENST00000531352 PCDHA8Q9Y5H6 950 aa13.4□□□□□ -0.27
ACER3-210ENST00000531352 DOCK5Q9H7D0 1870 aa13.39□□□□□ -0.27
ACER3-210ENST00000531352 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
ACER3-210ENST00000531352 MYADML2A6NDP7 307 aa13.39□□□□□ -0.27
ACER3-210ENST00000531352 RARBP10826 455 aa13.39□□□□□ -0.27
ACER3-210ENST00000531352 MRPL12P52815 198 aaKnown RBP13.39□□□□□ -0.27
ACER3-210ENST00000531352 COPS5Q92905 334 aa13.39□□□□□ -0.27
ACER3-210ENST00000531352 WDR11Q9BZH6 1224 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms