RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 POLR2MP0CAP2 368 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 STAT6P42226 847 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 TXKP42681 527 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 AFMP43652 599 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 HSD17B4P51659 736 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 ZNF75DP51815 510 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
SRPRA-205ENST00000531104 SPP2Q13103 211 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 TMEM266Q2M3C6 531 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 HYIQ5T013 277 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 USP50Q70EL3 339 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-205ENST00000531104 ETNPPLQ8TBG4 499 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
SRPRA-205ENST00000531104 CLEC4DQ8WXI8 215 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 TBC1D5Q92609 795 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 PNMA5Q96PV4 448 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 RPAP3Q9H6T3 665 aaPredicted RBP12.32□□□□□ -0.44
SRPRA-205ENST00000531104 PNMA2Q9UL42 364 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 ADAMTS5Q9UNA0 930 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 AFG3L2Q9Y4W6 797 aa12.32□□□□□ -0.44
SRPRA-205ENST00000531104 WDR90Q96KV7 1748 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 SPDYE3A6NKU9 549 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 BECN2A8MW95 431 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 PLCG1P19174 1290 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 CDC25BP30305 580 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 GRB10Q13322 594 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 DGKZQ13574 1117 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 CUL4BQ13620 913 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 ISM2Q6H9L7 571 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-205ENST00000531104 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-205ENST00000531104 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
SRPRA-205ENST00000531104 AGBL1Q96MI9 1066 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 RAB34Q9BZG1 259 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 TTC12Q9H892 705 aaPredicted RBP12.31□□□□□ -0.44
SRPRA-205ENST00000531104 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 DACH1Q9UI36 760 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 FZD1Q9UP38 647 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 SNCAIPQ9Y6H5 919 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 RPTORQ8N122 1335 aa12.31□□□□□ -0.44
SRPRA-205ENST00000531104 POLR2AP24928 1970 aaKnown RBP12.3□□□□□ -0.44
SRPRA-205ENST00000531104 SMCHD1A6NHR9 2005 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 ADM5C9JUS6 153 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 KLRC4O43908 158 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 ERCC5P28715 1186 aaPredicted RBP12.3□□□□□ -0.44
SRPRA-205ENST00000531104 CASP1P29466 404 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
SRPRA-205ENST00000531104 MAP3K9P80192 1104 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 MYL5Q02045 173 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 KCNB1Q14721 858 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 DPY19L2Q6NUT2 758 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 CNNM4Q6P4Q7 775 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 SLFN12Q8IYM2 578 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 ENOX1Q8TC92 643 aaKnown RBP12.3□□□□□ -0.44
SRPRA-205ENST00000531104 MRFAP1L1Q96HT8 127 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 FAM20AQ96MK3 541 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 MED15Q96RN5 788 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 C7orf25Q9BPX7 421 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 BLOC1S4Q9NUP1 217 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 MAP3K20Q9NYL2 800 aaKnown RBP12.3□□□□□ -0.44
SRPRA-205ENST00000531104 STK17AQ9UEE5 414 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 CCPG1Q9ULG6 757 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 ZHX2Q9Y6X8 837 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 OTOFQ9HC10 1997 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 FRMPD4Q14CM0 1322 aa12.3□□□□□ -0.44
SRPRA-205ENST00000531104 RBBP6Q7Z6E9 1792 aaKnown RBP12.29□□□□□ -0.44
SRPRA-205ENST00000531104 GLTPD2A6NH11 291 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 VWA5AO00534 786 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 FLOT1O75955 427 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 CFBP00751 764 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 RPN1P04843 607 aaKnown RBP12.29□□□□□ -0.44
SRPRA-205ENST00000531104 DSG3P32926 999 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 FMR1Q06787 632 aaKnown RBP eCLIP12.29□□□□□ -0.44
SRPRA-205ENST00000531104 SPIRE1Q08AE8 756 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 STAMQ92783 540 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 TRIM44Q96DX7 344 aaPredicted RBP12.29□□□□□ -0.44
SRPRA-205ENST00000531104 CALML4Q96GE6 196 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 NUDT12Q9BQG2 462 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 TANGO6Q9C0B7 1094 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 PCDHA12Q9UN75 941 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 SCN4AP35499 1836 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 MYPNQ86TC9 1320 aa12.29□□□□□ -0.44
SRPRA-205ENST00000531104 POTEMA6NI47 508 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 POTECB2RU33 542 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 ATP2A1O14983 1001 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 MSH4O15457 936 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 ZBED4O75132 1171 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
SRPRA-205ENST00000531104 EPHX2P34913 555 aa12.28□□□□□ -0.44
SRPRA-205ENST00000531104 OAZ1P54368 228 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms