RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 SYTL5Q8TDW5 730 aaPredicted RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 COPS5Q92905 334 aa18.42■□□□□ 0.54
CPSF1-205ENST00000531042 TAAR1Q96RJ0 339 aa18.42■□□□□ 0.54
CPSF1-205ENST00000531042 MTG1Q9BT17 334 aaPredicted RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 GPHNQ9NQX3 736 aaPredicted RBP18.42■□□□□ 0.54
CPSF1-205ENST00000531042 A6NJR5 290 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 ARIH2O95376 493 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 CHMLP26374 656 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 CCL23P55773 120 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 TTLL4Q14679 1199 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 STAG2Q8N3U4 1231 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
CPSF1-205ENST00000531042 RUFY2Q8WXA3 655 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 HERVK_113Q902F9 699 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 WNT8AQ9H1J5 351 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 COL20A1Q9P218 1284 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 MRPL11Q9Y3B7 192 aaKnown RBP18.41■□□□□ 0.54
CPSF1-205ENST00000531042 SCN10AQ9Y5Y9 1956 aa18.41■□□□□ 0.54
CPSF1-205ENST00000531042 GRXCR1A8MXD5 290 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 KPNA6O60684 536 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 FGBP02675 491 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 CYP21A2P08686 494 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 IRX6P78412 446 aaPredicted RBP18.4■□□□□ 0.54
CPSF1-205ENST00000531042 PTH1RQ03431 593 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 CCDC62Q6P9F0 684 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.4■□□□□ 0.54
CPSF1-205ENST00000531042 MAFAQ8NHW3 353 aaPredicted RBP18.4■□□□□ 0.54
CPSF1-205ENST00000531042 IWS1Q96ST2 819 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 TRMT13Q9NUP7 481 aaKnown RBP18.4■□□□□ 0.54
CPSF1-205ENST00000531042 CHD9Q3L8U1 2897 aa18.4■□□□□ 0.54
CPSF1-205ENST00000531042 KIAA1217Q5T5P2 1943 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 KLRF2D3W0D1 207 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 SUPT20HL2P0C7V6 817 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 FOSL2P15408 326 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 TRDNQ13061 729 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 GRIN2CQ14957 1233 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 NBPF20Q3BBV1 942 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 TIFAQ96CG3 184 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 MTMR8Q96EF0 704 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 RMDN3Q96TC7 470 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 PBX4Q9BYU1 374 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 MAD2L2Q9UI95 211 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 U3KPZ7 1027 aaPredicted RBP18.39■□□□□ 0.53
CPSF1-205ENST00000531042 PRUNE2Q8WUY3 3088 aa18.39■□□□□ 0.53
CPSF1-205ENST00000531042 PALM3A6NDB9 673 aaPredicted RBP18.38■□□□□ 0.53
CPSF1-205ENST00000531042 CYP2C9P11712 490 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 PBX2P40425 430 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 STXBP2Q15833 593 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 NFRKBQ6P4R8 1299 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 SEPT14Q6ZU15 432 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
CPSF1-205ENST00000531042 AMNQ9BXJ7 453 aa18.38■□□□□ 0.53
CPSF1-205ENST00000531042 MTIF3Q9H2K0 278 aaKnown RBP18.38■□□□□ 0.53
CPSF1-205ENST00000531042 CXXC1Q9P0U4 656 aaPredicted RBP18.38■□□□□ 0.53
CPSF1-205ENST00000531042 OPLAHO14841 1288 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 ZBTB5O15062 677 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 CFBP00751 764 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 LY6KQ17RY6 165 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 FAM47CQ5HY64 1035 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 ARHGEF16Q5VV41 709 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 OTOP2Q7RTS6 562 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 VWCEQ96DN2 955 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 SCLYQ96I15 445 aa18.37■□□□□ 0.53
CPSF1-205ENST00000531042 SGSM2O43147 1006 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 PPP1R11O60927 126 aaPredicted RBP18.36■□□□□ 0.53
CPSF1-205ENST00000531042 GH1P01241 217 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 EIF2AK2P19525 551 aaKnown RBP18.36■□□□□ 0.53
CPSF1-205ENST00000531042 HSD17B4P51659 736 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 GHRHRQ02643 423 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 PTPN11Q06124 597 aaPredicted RBP18.36■□□□□ 0.53
CPSF1-205ENST00000531042 ARHGAP1Q07960 439 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 GRM4Q14833 912 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 PPP1R13LQ8WUF5 828 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 TAF6LQ9Y6J9 622 aa18.36■□□□□ 0.53
CPSF1-205ENST00000531042 GBF1Q92538 1859 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 E7EWF7 191 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 IFIT3O14879 490 aaKnown RBP18.35■□□□□ 0.53
CPSF1-205ENST00000531042 EIF3JO75822 258 aaKnown RBP18.35■□□□□ 0.53
CPSF1-205ENST00000531042 NR3C2P08235 984 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 MMP3P08254 477 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 RAB30Q15771 203 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 SLC35G1Q2M3R5 365 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 NCOA7Q8NI08 942 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 AFG1LQ8WV93 481 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 RIOX1Q9H6W3 641 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
CPSF1-205ENST00000531042 PCDHA1Q9Y5I3 950 aa18.35■□□□□ 0.53
CPSF1-205ENST00000531042 CUL9Q8IWT3 2517 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 SCN5AQ14524 2016 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 ERICH2A1L162 156 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 WTAPQ15007 396 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 STOX1Q6ZVD7 989 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 RALYLQ86SE5 291 aaKnown RBP18.34■□□□□ 0.53
CPSF1-205ENST00000531042 SAMD3Q8N6K7 520 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 MSRAQ9UJ68 235 aa18.34■□□□□ 0.53
CPSF1-205ENST00000531042 DDX41Q9UJV9 622 aaKnown RBP18.34■□□□□ 0.53
CPSF1-205ENST00000531042 PFKMP08237 780 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms