RNA–Protein interactions for RNA: ENST00000530958.5

ATM-215, Transcript of ATM serine/threonine kinase, humanhuman

TSL 2 BASIC

Gene ATM, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-215ENST00000530958 ANO3Q9BYT9 981 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 ATP8B3O60423 1300 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 TLR3O15455 904 aaKnown RBP8.36□□□□□ -1.07
ATM-215ENST00000530958 NT5C2P49902 561 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 DMP1Q13316 513 aaPredicted RBP8.36□□□□□ -1.07
ATM-215ENST00000530958 CLUL1Q15846 466 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 VPS72Q15906 364 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
ATM-215ENST00000530958 NSUN4Q96CB9 384 aaKnown RBP8.36□□□□□ -1.07
ATM-215ENST00000530958 LY9Q9HBG7 655 aa8.36□□□□□ -1.07
ATM-215ENST00000530958 TYW5A2RUC4 315 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 CTAGE15A4D2H0 777 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 RIOK3O14730 519 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 CTAGE8P0CG41 777 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 CD19P15391 556 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 ERCC5P28715 1186 aaPredicted RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 ALDH3A1P30838 453 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 MKRN3Q13064 507 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 C3orf67Q6ZVT6 689 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 CTAGE6Q86UF2 777 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 CTAGE4Q8IX94 777 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 PRIMPOLQ96LW4 560 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 NUP58Q9BVL2 599 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 ZNF341Q9BYN7 854 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 PAXBP1Q9Y5B6 917 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 SPOPO43791 374 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 CRCPO75575 148 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 GTF2F1P35269 517 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATM-215ENST00000530958 TUBB4BP68371 445 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 RASA3Q14644 834 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 GPBP1Q86WP2 473 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 UBL4BQ8N7F7 174 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 SAMSN1Q9NSI8 373 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 PI4KBQ9UBF8 816 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 PP2D1A8MPX8 630 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 HS1BP3Q53T59 392 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 IQCDQ96DY2 449 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 FOXP1Q9H334 677 aaPredicted RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 PREX1Q8TCU6 1659 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 TMEM131LA2VDJ0 1609 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 TNNC1P63316 161 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 GPR161Q8N6U8 529 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 GPATCH11Q8N954 259 aa8.35□□□□□ -1.07
ATM-215ENST00000530958 CACTINQ8WUQ7 758 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 DDX25Q9UHL0 483 aaKnown RBP8.35□□□□□ -1.07
ATM-215ENST00000530958 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.35□□□□□ -1.07
ATM-215ENST00000530958 SPATA31A5Q5VU36 1347 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 SPATA31A7Q8IWB4 1347 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 CTAGE9A4FU28 777 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 FOXN1O15353 648 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 U2AF2P26368 475 aaKnown RBP eCLIP8.34□□□□□ -1.071e-8■□□□□ 10.6
ATM-215ENST00000530958 CYP2J2P51589 502 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 CALCOCO2Q13137 446 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 PRAMEF18Q5VWM3 479 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 DCUN1D2Q6PH85 259 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 GDAP1L1Q96MZ0 367 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 GCNAQ96QF7 691 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 CARD6Q9BX69 1037 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 FAM107BQ9H098 131 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 PTPREP23469 700 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 IGBP1P78318 339 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 COL9A3Q14050 684 aaPredicted RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 USP49Q70CQ1 688 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 EPB41L4AQ9HCS5 686 aaPredicted RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 MROH2AA6NES4 1674 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 A0A1W2PQ27 194 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 A0A1W2PQ64 194 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 A0A1W2PQD8 194 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 GNAT1P11488 350 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 CRKP46108 304 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 PDZD4Q76G19 769 aaPredicted RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 FOXP4Q8IVH2 680 aaPredicted RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 TBC1D16Q8TBP0 767 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 CCDC127Q96BQ5 260 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 AKT3Q9Y243 479 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 ANTXR2P58335 489 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 RNASELQ05823 741 aaKnown RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 ARHGAP44Q17R89 818 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 RRAGAQ7L523 313 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 SRGAP1Q7Z6B7 1085 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 DGKHQ86XP1 1220 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATM-215ENST00000530958 STAG1Q8WVM7 1258 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 LBHD1Q9BQE6 289 aaPredicted RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 ZBED2Q9BTP6 218 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 BRIP1Q9BX63 1249 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 VWDEQ8N2E2 1590 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 BMP3P12645 472 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 AKR1B1P15121 316 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 YY1P25490 414 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 COPB2P35606 906 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 SF3B3Q15393 1217 aaKnown RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 TMTC3Q6ZXV5 915 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 PRPF31Q8WWY3 499 aaKnown RBP8.34□□□□□ -1.07
ATM-215ENST00000530958 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 SUGCTQ9HAC7 445 aa8.34□□□□□ -1.07
ATM-215ENST00000530958 KDM6AO15550 1401 aaPredicted RBP8.34□□□□□ -1.08
ATM-215ENST00000530958 KCNA4P22459 653 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms