RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 RCOR1Q9UKL0 485 aa9.68□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 LOC285556D6RIA3 1793 aa9.68□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PFASO15067 1338 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 WNT7AO00755 349 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 SPTLC2O15270 562 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 YEATS4O95619 227 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 BMP15O95972 392 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 MYCLP12524 364 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 EIF2AK2P19525 551 aaKnown RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 MAPK4P31152 587 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 SREBF1P36956 1147 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 ME1P48163 572 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 GHRHRQ02643 423 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 SLC39A14Q15043 492 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 FAM110CQ1W6H9 321 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 C17orf99Q6UX52 265 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PLEKHH3Q7Z736 793 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 JMYQ8N9B5 988 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 LINC00301Q8NCQ3 95 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 KCNG4Q8TDN1 519 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 NSUN6Q8TEA1 469 aaKnown RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PURBQ96QR8 312 aaKnown RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 DDX25Q9UHL0 483 aaKnown RBP9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 IVNS1ABPQ9Y6Y0 642 aa9.67□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 STRNO43815 780 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 TRPA1O75762 1119 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 TDP2O95551 362 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 TBC1D8O95759 1140 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PGK2P07205 417 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CYP3A4P08684 503 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 BCRP11274 1271 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 GCFC2P16383 781 aaKnown RBP9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 HSPA6P17066 643 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 MARCKSP29966 332 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 C1QTNF8P60827 252 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CNTN2Q02246 1040 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PTGDRQ13258 359 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PTPAQ15257 358 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 NFKBIBQ15653 356 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PPP4R3AQ6IN85 833 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 ZFP91Q96JP5 570 aaPredicted RBP9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PXMP2Q9NR77 195 aa9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 ADD3Q9UEY8 706 aaKnown RBP9.66□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 RPTORQ8N122 1335 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 ADGRA2Q96PE1 1338 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CYP3A7-CYP3A51PA0A087WV96 503 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 B4DLN1 442 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 EDIL3O43854 480 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 NEMFO60524 1076 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PPP6R2O75170 966 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 NR3C2P08235 984 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PTMSP20962 102 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PTPREP23469 700 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CYP3A7P24462 503 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CCND2P30279 289 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 ORC2Q13416 577 aaPredicted RBP9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PGM5Q15124 567 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 CALCRLQ16602 461 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PRR16Q569H4 304 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 XRRA1Q6P2D8 792 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 GPR142Q7Z601 462 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 DPP9Q86TI2 863 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PLA2G4DQ86XP0 818 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 UIMC1Q96RL1 719 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 MPHOSPH6Q99547 160 aaKnown RBP9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 PDCD2LQ9BRP1 358 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 RNF186Q9NXI6 227 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 MRVI1Q9Y6F6 885 aa9.65□□□□□ -0.86
NEDD8-MDP1-201ENST00000530579 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 SOWAHBA6NEL2 793 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 SLC15A5A6NIM6 579 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 FAM86B1E9PN63 330 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 LAD1O00515 517 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 SLC37A4O43826 429 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 FAM86B2P0C5J1 330 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 ADORA2AP29274 412 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 CIITAP33076 1130 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 TXKP42681 527 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 ATP2C1P98194 919 aaPredicted RBP9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 PDE4DQ08499 809 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 Q4G0T1 1027 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 CEP55Q53EZ4 464 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 PCNX4Q63HM2 1172 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 MOXD1Q6UVY6 613 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 DTHD1Q6ZMT9 781 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 VSIG10LQ86VR7 867 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 POTEDQ86YR6 584 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 ABRAQ8N0Z2 381 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 C4orf32Q8N8J7 132 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 FAM133AQ8N9E0 248 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 KRI1Q8N9T8 703 aaKnown RBP9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 TMEM87AQ8NBN3 555 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 DNERQ8NFT8 737 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 IL31RAQ8NI17 732 aa9.64□□□□□ -0.87
NEDD8-MDP1-201ENST00000530579 CYP2W1Q8TAV3 490 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms