RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	CHD1L	Q86WJ1	897 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ATXN2L	Q8WWM7	1075 aa	Known RBP	18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ZKSCAN3	Q9BRR0	538 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	KAT14	Q9H8E8	782 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	DIAPH3	Q9NSV4	1193 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PCDHA11	Q9Y5I1	949 aa		18.24	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ABCB11	O95342	1321 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PITPNM1	O00562	1244 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	KDM4A	O75164	1064 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ACTN1	P12814	892 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ATP2A2	P16615	1042 aa	Known RBP	18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ADGRE1	Q14246	886 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ASPRV1	Q53RT3	343 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PPP2R2D	Q66LE6	453 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	B4GALNT3	Q6L9W6	998 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PLEKHM2	Q8IWE5	1019 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PPM1E	Q8WY54	764 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ANKS1A	Q92625	1134 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	VWCE	Q96DN2	955 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	UBA5	Q9GZZ9	404 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	THEG	Q9P2T0	379 aa		18.23	■□□□□ 0.51
TM9SF1-209	ENST00000530468	IGFBP4	P22692	258 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	NUCB1	Q02818	461 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	CWC27	Q6UX04	472 aa	Known RBP	18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	MCF2L2	Q86YR7	1114 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	RETREG2	Q8NC44	543 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	NSUN6	Q8TEA1	469 aa	Known RBP	18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	COPS5	Q92905	334 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	DSCC1	Q9BVC3	393 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	SCN10A	Q9Y5Y9	1956 aa		18.22	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PRUNE2	Q8WUY3	3088 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	RABGGTB	P53611	331 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	BFSP2	Q13515	415 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	IMMT	Q16891	758 aa	Known RBP	18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	CCDC62	Q6P9F0	684 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	DEFB128	Q7Z7B8	93 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	ADGRF4	Q8IZF3	695 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	IWS1	Q96ST2	819 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	CPVL	Q9H3G5	476 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	PRDM6	Q9NQX0	595 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	NOD1	Q9Y239	953 aa		18.21	■□□□□ 0.51
TM9SF1-209	ENST00000530468	VCAN	P13611	3396 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468		B4E1Z4	1266 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ARIH2	O95376	493 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	IQCF3	P0C7M6	154 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	SYTL5	Q8TDW5	730 aa	Predicted RBP	18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	SLC9A7	Q96T83	725 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	KRT23	Q9C075	422 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CNNM2	Q9H8M5	875 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CTNNA3	Q9UI47	895 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	MRPL11	Q9Y3B7	192 aa	Known RBP	18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	LAMA4	Q16363	1823 aa		18.2	■□□□□ 0.5
TM9SF1-209	ENST00000530468	GH1	P01241	217 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	PARP1	P09874	1014 aa	Known RBP	18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	STXBP2	Q15833	593 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	QRICH1	Q2TAL8	776 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TMEM67	Q5HYA8	995 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	SESTD1	Q86VW0	696 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	FBXO11	Q86XK2	927 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CCDC155	Q8N6L0	562 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ENAH	Q8N8S7	591 aa	Predicted RBP	18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	PHOSPHO2	Q8TCD6	241 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ASB2	Q96Q27	587 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TAAR1	Q96RJ0	339 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	RMDN3	Q96TC7	470 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ZSWIM5	Q9P217	1185 aa		18.19	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TNFRSF10A	O00220	468 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	DHX16	O60231	1041 aa	Known RBP	18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	MMP3	P08254	477 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	MYOG	P15173	224 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	MRPS5	P82675	430 aa	Known RBP	18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CCDC85B	Q15834	202 aa	Predicted RBP	18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	SEPT14	Q6ZU15	432 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CAGE1	Q8TC20	777 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	AFG1L	Q8WV93	481 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TBC1D5	Q92609	795 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	UBAC1	Q9BSL1	405 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	COL20A1	Q9P218	1284 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	GBF1	Q92538	1859 aa		18.18	■□□□□ 0.5
TM9SF1-209	ENST00000530468	BAIAP3	O94812	1187 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	IGHD	P01880	384 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CAST	P20810	708 aa	Known RBP	18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ARHGAP1	Q07960	439 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	PTGIS	Q16647	500 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	LY6K	Q17RY6	165 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	ARHGEF16	Q5VV41	709 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	AFAP1L1	Q8TED9	768 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	FTO	Q9C0B1	505 aa	Known RBP eCLIP	18.17	■□□□□ 0.5	6e-6	■□□□□ 9
TM9SF1-209	ENST00000530468	JMJD4	Q9H9V9	463 aa		18.17	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CA3	P07451	260 aa		18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	CHMP4BP1	P59074	171 aa		18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	DGKD	Q16760	1214 aa		18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	IFIT1B	Q5T764	474 aa	Known RBP	18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	PPP1R13L	Q8WUF5	828 aa		18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	EMID1	Q96A84	441 aa	Predicted RBP	18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	TANC1	Q9C0D5	1861 aa		18.16	■□□□□ 0.5
TM9SF1-209	ENST00000530468	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.15	■□□□□ 0.5
TM9SF1-209	ENST00000530468	KIF28P	B7ZC32	967 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms