RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 CYP2J2P51589 502 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 BPIFB4P59827 614 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 EMBQ6PCB8 327 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 CCT6BQ92526 530 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 MAP3K4Q9Y6R4 1608 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 XDHP47989 1333 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 PGRMC1O00264 195 aaKnown RBP16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 SH2B2O14492 632 aaPredicted RBP16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 DAPK3O43293 454 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 ADORA1P30542 326 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 MAP7Q14244 749 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 ZNF772Q68DY9 489 aaPredicted RBP16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 WHAMMQ8TF30 809 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 LMNB1P20700 586 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 CCDC144BQ3MJ40 725 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 MAP3K21Q5TCX8 1036 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 IFNB1P01574 187 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 NAA35Q5VZE5 725 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 RPUSD2Q8IZ73 545 aaKnown RBP16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 DEPTORQ8TB45 409 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 HAUS1Q96CS2 278 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 USH1CQ9Y6N9 552 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 WDR19Q8NEZ3 1342 aa16.85■□□□□ 0.29
PCDHA4-203ENST00000530339 IFNAR2P48551 515 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 NR5A1Q13285 461 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 RASA3Q14644 834 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 HADHQ16836 314 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 C10orf76Q5T2E6 689 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 TRIM11Q96F44 468 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 NUF2Q9BZD4 464 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 CNOT10Q9H9A5 744 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 NHEJ1Q9H9Q4 299 aaPredicted RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 RAB20Q9NX57 234 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 DAAM1Q9Y4D1 1078 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 ZNF804BA4D1E1 1349 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 NR1D1P20393 614 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 VPS41P49754 854 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 DCAF15Q66K64 600 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 PALM2Q8IXS6 379 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 SMCR8Q8TEV9 937 aaPredicted RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 PUS3Q9BZE2 481 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 THAP9Q9H5L6 903 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 TRPM1Q7Z4N2 1603 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 SASH1O94885 1247 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 PHKA1P46020 1223 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 TOB2Q14106 344 aaPredicted RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 C1orf112Q9NSG2 853 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 EIF3CLB5ME19 914 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 PRPF6O94906 941 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 CYP2E1P05181 493 aaPredicted RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 BTDP43251 543 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 GYG1P46976 350 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 ZBTB8OSQ8IWT0 167 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 FAM178BQ8IXR5 827 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 TCP11Q8WWU5 503 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 EIF3CQ99613 913 aaKnown RBP16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 MTA3Q9BTC8 594 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 GREM2Q9H772 168 aa16.84■□□□□ 0.29
PCDHA4-203ENST00000530339 CTNND1O60716 968 aaKnown RBP16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PEX19P40855 299 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PDE6CP51160 858 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 LMNB2Q03252 620 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PSMD2Q13200 908 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 CTAGE3PQ8IX95 158 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 LARP4BQ92615 738 aaKnown RBP16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 LRRD1A4D1F6 860 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PPIP5K2O43314 1243 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 EVI5O60447 810 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 ATF2P15336 505 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 GTF2IP78347 998 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 E2F5Q15329 346 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 NSMFQ6X4W1 530 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 OSBP2Q969R2 916 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 KIF2CQ99661 725 aa16.83■□□□□ 0.29
PCDHA4-203ENST00000530339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 NAA30Q147X3 362 aaPredicted RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CERKLQ49MI3 558 aaPredicted RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 AP1ARQ63HQ0 302 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 DDX39AO00148 427 aaKnown RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CLGNO14967 610 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 TNNI1P19237 187 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CCNE1P24864 410 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 LRRC8CQ8TDW0 803 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 MAGOHBQ96A72 148 aaKnown RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 TRIM6Q9C030 488 aaPredicted RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 POLR2BP30876 1174 aaKnown RBP16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CXCR5P32302 372 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 RCAN1P53805 252 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 GYS2P54840 703 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 IL9RQ01113 521 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 LRCH2Q5VUJ6 765 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 MMS22LQ6ZRQ5 1243 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CEP120Q8N960 986 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CNKSR1Q969H4 720 aa16.83■□□□□ 0.28
PCDHA4-203ENST00000530339 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms