RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 ERVK-24P63145 666 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 DUOXA2Q1HG44 320 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 OVOS1Q6IE37 1185 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 FMR1NBQ8N0W7 255 aaPredicted RBP9.14□□□□□ -0.95
SVIP-204ENST00000530199 TAB3Q8N5C8 712 aaPredicted RBP9.14□□□□□ -0.95
SVIP-204ENST00000530199 ZSCAN1Q8NBB4 408 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 MICAL1Q8TDZ2 1067 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 ADAM30Q9UKF2 790 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 ANKRD26Q9UPS8 1709 aa9.14□□□□□ -0.95
SVIP-204ENST00000530199 A0A0A0MRY4 1105 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 FKTNO75072 461 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 PGRP06401 933 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 ALDH1B1P30837 517 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 ID3Q02535 119 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 RASAL3Q86YV0 1011 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 TMPRSS13Q9BYE2 586 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 MUC3AQ02505 3323 aa9.13□□□□□ -0.95
SVIP-204ENST00000530199 RAB3GAP2Q9H2M9 1393 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 ST20-MTHFSA0A0A6YYL1 179 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 NME1P15531 152 aaKnown RBP9.12□□□□□ -0.95
SVIP-204ENST00000530199 PLA2G5P39877 138 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 MTHFSP49914 203 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 ETF1P62495 437 aaKnown RBP9.12□□□□□ -0.95
SVIP-204ENST00000530199 RAC1P63000 192 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 PPM1JQ5JR12 505 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 EGFLAMQ63HQ2 1017 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 NLRC3Q7RTR2 1065 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.12□□□□□ -0.95
SVIP-204ENST00000530199 TRIM11Q96F44 468 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 RNPC3Q96LT9 517 aaKnown RBP9.12□□□□□ -0.95
SVIP-204ENST00000530199 PPP1R9AQ9ULJ8 1098 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 ROCK2O75116 1388 aaKnown RBP9.12□□□□□ -0.95
SVIP-204ENST00000530199 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
SVIP-204ENST00000530199 MRC1P22897 1456 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 MEGF11A6BM72 1044 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 NPHP1O15259 732 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 TMPRSS2O15393 492 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 PDPK1O15530 556 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 WISP1O95388 367 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 ACRP10323 421 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 TM4SF4P48230 202 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 GMPSP49915 693 aaPredicted RBP9.11□□□□□ -0.95
SVIP-204ENST00000530199 RASGRF1Q13972 1273 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 ZBTB37Q5TC79 503 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 CDCP2Q5VXM1 449 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 ZNF385CQ66K41 422 aaPredicted RBP9.11□□□□□ -0.95
SVIP-204ENST00000530199 ZNF662Q6ZS27 426 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 NIM1KQ8IY84 436 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 NEDD1Q8NHV4 660 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 RUSC1Q9BVN2 902 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 VPS33BQ9H267 617 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 ENAMQ9NRM1 1142 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 CRIM1Q9NZV1 1036 aa9.11□□□□□ -0.95
SVIP-204ENST00000530199 TNFRSF10CO14798 259 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 FANCGO15287 622 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 WFS1O76024 890 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 GJB6O95452 261 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 TCEAL1Q15170 157 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 AMOTQ4VCS5 1084 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 PLEKHO1Q53GL0 409 aaPredicted RBP9.1□□□□□ -0.95
SVIP-204ENST00000530199 LINC00114Q6XXX2 140 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 KIAA1211Q6ZU35 1233 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 ACSF2Q96CM8 615 aaPredicted RBP9.1□□□□□ -0.95
SVIP-204ENST00000530199 DNAJC7Q99615 494 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 PICK1Q9NRD5 415 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 KLHL3Q9UH77 587 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 TRIM17Q9Y577 477 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 SLC12A7Q9Y666 1083 aa9.1□□□□□ -0.95
SVIP-204ENST00000530199 CHURC1-FNTBB4DL54 471 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 DDAH1O94760 285 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 HSD3B2P26439 372 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 CXCL9Q07325 125 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
SVIP-204ENST00000530199 ARSHQ5FYA8 562 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 C6orf15Q6UXA7 325 aaPredicted RBP9.09□□□□□ -0.95
SVIP-204ENST00000530199 DLK2Q6UY11 383 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 UNC5AQ6ZN44 842 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 OTOP1Q7RTM1 612 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 KRT26Q7Z3Y9 468 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 MCATQ8IVS2 390 aaKnown RBP9.09□□□□□ -0.95
SVIP-204ENST00000530199 FAM178BQ8IXR5 827 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 FANCD2OSQ96PS1 177 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 SLC9A7Q96T83 725 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 PLVAPQ9BX97 442 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 RNF208Q9H0X6 261 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 SUGCTQ9HAC7 445 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 DISC1Q9NRI5 854 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 PTPN22Q9Y2R2 807 aa9.09□□□□□ -0.95
SVIP-204ENST00000530199 ANKRD62A6NC57 917 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
SVIP-204ENST00000530199 HSP90B1P14625 803 aaKnown RBP9.08□□□□□ -0.96
SVIP-204ENST00000530199 NTF4P34130 210 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 SNRPNP63162 240 aaKnown RBP9.08□□□□□ -0.96
SVIP-204ENST00000530199 FKBP1BP68106 108 aa9.08□□□□□ -0.96
SVIP-204ENST00000530199 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms