RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CLEC4DQ8WXI8 215 aa18.93■□□□□ 0.62
COL16A1-216ENST00000529928 ARNTL2Q8WYA1 636 aa18.93■□□□□ 0.62
COL16A1-216ENST00000529928 NOD1Q9Y239 953 aa18.93■□□□□ 0.62
COL16A1-216ENST00000529928 BDP1A6H8Y1 2624 aa18.93■□□□□ 0.62
COL16A1-216ENST00000529928 PRRC2BQ5JSZ5 2229 aaKnown RBP18.93■□□□□ 0.62
COL16A1-216ENST00000529928 REV3LO60673 3130 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 EPOPA6NHQ4 379 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 EDNRBP24530 442 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 RPS6P62753 249 aaKnown RBP18.92■□□□□ 0.62
COL16A1-216ENST00000529928 HLA-CQ95604 372 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 TMEM47Q9BQJ4 181 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 GPCPD1Q9NPB8 672 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 TOMM22Q9NS69 142 aa18.92■□□□□ 0.62
COL16A1-216ENST00000529928 FRMPD2Q68DX3 1309 aaPredicted RBP18.92■□□□□ 0.62
COL16A1-216ENST00000529928 TXNP10599 105 aaKnown RBP18.91■□□□□ 0.62
COL16A1-216ENST00000529928 MX1P20591 662 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 KCNJ6P48051 423 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 KRT40Q6A162 431 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 CCDC155Q8N6L0 562 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 OTUD7AQ8TE49 926 aaPredicted RBP18.91■□□□□ 0.62
COL16A1-216ENST00000529928 TCP11L1Q9NUJ3 509 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 WDR19Q8NEZ3 1342 aa18.91■□□□□ 0.62
COL16A1-216ENST00000529928 TRANK1O15050 2925 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 TLL1O43897 1013 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 ARHGEF15O94989 841 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 PDHBP11177 359 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 ALX1Q15699 326 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 PTGISQ16647 500 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 RRP12Q5JTH9 1297 aaKnown RBP18.9■□□□□ 0.62
COL16A1-216ENST00000529928 CAGE1Q8TC20 777 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 AFAP1L1Q8TED9 768 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 PPP1R13LQ8WUF5 828 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 COPS5Q92905 334 aa18.9■□□□□ 0.62
COL16A1-216ENST00000529928 ARIH1Q9Y4X5 557 aaPredicted RBP18.9■□□□□ 0.62
COL16A1-216ENST00000529928 GRB10Q13322 594 aa18.89■□□□□ 0.61
COL16A1-216ENST00000529928 PARNO95453 639 aaKnown RBP18.88■□□□□ 0.61
COL16A1-216ENST00000529928 CHMP4BP1P59074 171 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 ZNF543Q08ER8 600 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 RGS22Q8NE09 1264 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 TTC14Q96N46 770 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 HELLSQ9NRZ9 838 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 LMCD1Q9NZU5 365 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 HCN4Q9Y3Q4 1203 aa18.88■□□□□ 0.61
COL16A1-216ENST00000529928 ARIH2O95376 493 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 FGAP02671 866 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
COL16A1-216ENST00000529928 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 LRFN3Q9BTN0 628 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 ZBED2Q9BTP6 218 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 MAF1Q9H063 256 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 EPHX3Q9H6B9 360 aa18.87■□□□□ 0.61
COL16A1-216ENST00000529928 ZMYM6O95789 1325 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 LPXNO60711 386 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 SNHG28P0DPA3 235 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 SELPP16109 830 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 TMEM31Q5JXX7 168 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 GPATCH4Q5T3I0 446 aaKnown RBP18.86■□□□□ 0.61
COL16A1-216ENST00000529928 CCDC62Q6P9F0 684 aa18.86■□□□□ 0.61
COL16A1-216ENST00000529928 COL4A4P53420 1690 aaPredicted RBP18.85■□□□□ 0.61
COL16A1-216ENST00000529928 TET1Q8NFU7 2136 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 SALL3Q9BXA9 1300 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 GH1P01241 217 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 MMP3P08254 477 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 PCP11498 1178 aaKnown RBP18.85■□□□□ 0.61
COL16A1-216ENST00000529928 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
COL16A1-216ENST00000529928 RBL2Q08999 1139 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 USH1GQ495M9 461 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 GDF6Q6KF10 455 aaPredicted RBP18.85■□□□□ 0.61
COL16A1-216ENST00000529928 CNKSR3Q6P9H4 555 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 LRRC8DQ7L1W4 858 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 SPRED2Q7Z698 418 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 AFG1LQ8WV93 481 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 CTAGE1Q96RT6 745 aa18.85■□□□□ 0.61
COL16A1-216ENST00000529928 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
COL16A1-216ENST00000529928 LCHNA4D1U4 455 aa18.84■□□□□ 0.61
COL16A1-216ENST00000529928 CASTP20810 708 aaKnown RBP18.84■□□□□ 0.61
COL16A1-216ENST00000529928 ARHGAP1Q07960 439 aa18.84■□□□□ 0.61
COL16A1-216ENST00000529928 PCDHB15Q9Y5E8 787 aa18.84■□□□□ 0.61
COL16A1-216ENST00000529928 PTPRSQ13332 1948 aa18.84■□□□□ 0.61
COL16A1-216ENST00000529928 ABHD14A-ACY1A0A1B0GW23 586 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 EFCAB14O75071 495 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 GJB5O95377 273 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 CXCL10P02778 98 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 DEFB103AP81534 67 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 GPNMBQ14956 572 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 LY6KQ17RY6 165 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 MCMDC2Q4G0Z9 681 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 MFSD6Q6ZSS7 791 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 SEPT14Q6ZU15 432 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 NSUN6Q8TEA1 469 aaKnown RBP18.83■□□□□ 0.6
COL16A1-216ENST00000529928 GDPD5Q8WTR4 605 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 KAT2BQ92831 832 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 RAD9AQ99638 391 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 GTF2IRD1Q9UHL9 959 aa18.83■□□□□ 0.6
COL16A1-216ENST00000529928 TRIP12Q14669 1992 aaPredicted RBP18.82■□□□□ 0.6
COL16A1-216ENST00000529928 A0A0D9SFI3 127 aa18.82■□□□□ 0.6
COL16A1-216ENST00000529928 GPR37L1O60883 481 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms