RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 A6NJR5 290 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 TSPY2A6NKD2 308 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 B4DLN1 442 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 PATL2C9JE40 543 aaKnown RBP12.33□□□□□ -0.44
COPB1-207ENST00000529866 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
COPB1-207ENST00000529866 MRE11P49959 708 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 MRPL12P52815 198 aaKnown RBP12.33□□□□□ -0.44
COPB1-207ENST00000529866 CHMP4BP1P59074 171 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 SNAP25P60880 206 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 PDE4DQ08499 809 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 PTGISQ16647 500 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 CCDC96Q2M329 555 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 CNKSR3Q6P9H4 555 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 IFNL3Q8IZI9 196 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 PURBQ96QR8 312 aaKnown RBP12.33□□□□□ -0.44
COPB1-207ENST00000529866 RAD9AQ99638 391 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 NAPBQ9H115 298 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 SUGCTQ9HAC7 445 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
COPB1-207ENST00000529866 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.32□□□□□ -0.44
COPB1-207ENST00000529866 ABHD14A-ACY1A0A1B0GW23 586 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 GJB5O95377 273 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 SELPP16109 830 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 ERVK-21P61565 698 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
COPB1-207ENST00000529866 LRRC8DQ7L1W4 858 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 SPRED2Q7Z698 418 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 RANBP17Q9H2T7 1088 aaKnown RBP12.32□□□□□ -0.44
COPB1-207ENST00000529866 CTNNA3Q9UI47 895 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 RCAN3Q9UKA8 241 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 FAM50BQ9Y247 325 aa12.32□□□□□ -0.44
COPB1-207ENST00000529866 NFIBO00712 420 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 DCXO43602 365 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
COPB1-207ENST00000529866 CALML3P27482 149 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 DEFB103AP81534 67 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 PPARAQ07869 468 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 PTPROQ16827 1216 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 TIGD5Q53EQ6 642 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 SESTD1Q86VW0 696 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 DNERQ8NFT8 737 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.31□□□□□ -0.44
COPB1-207ENST00000529866 MTMR7Q9Y216 660 aa12.31□□□□□ -0.44
COPB1-207ENST00000529866 LINC01553A4QN01 128 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 M0R2C6 588 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 CXCL10P02778 98 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 IL9P15248 144 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 EDNRBP24530 442 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 NHLH1Q02575 133 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 RBL2Q08999 1139 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 RNF207Q6ZRF8 634 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 TMCO2Q7Z6W1 182 aaPredicted RBP12.3□□□□□ -0.44
COPB1-207ENST00000529866 FBXO22Q8NEZ5 403 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
COPB1-207ENST00000529866 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
COPB1-207ENST00000529866 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
COPB1-207ENST00000529866 IKBKEQ14164 716 aa12.29□□□□□ -0.44
COPB1-207ENST00000529866 COPS5Q92905 334 aa12.29□□□□□ -0.44
COPB1-207ENST00000529866 MRPL38Q96DV4 380 aaKnown RBP12.29□□□□□ -0.44
COPB1-207ENST00000529866 INSL6Q9Y581 213 aa12.29□□□□□ -0.44
COPB1-207ENST00000529866 SMARCA5O60264 1052 aaPredicted RBP12.28□□□□□ -0.44
COPB1-207ENST00000529866 RANBP6O60518 1105 aaKnown RBP12.28□□□□□ -0.44
COPB1-207ENST00000529866 NBNO60934 754 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 MMP3P08254 477 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 CKBP12277 381 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 CASTP20810 708 aaKnown RBP12.28□□□□□ -0.44
COPB1-207ENST00000529866 SLC16A2P36021 539 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 RPS6P62753 249 aaKnown RBP12.28□□□□□ -0.44
COPB1-207ENST00000529866 GDF6Q6KF10 455 aaPredicted RBP12.28□□□□□ -0.44
COPB1-207ENST00000529866 FAM117BQ6P1L5 589 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 BTNL9Q6UXG8 535 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 RASGRP2Q7LDG7 609 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 C7orf31Q8N865 590 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 NEK9Q8TD19 979 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 AFG1LQ8WV93 481 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 FBXL18Q96ME1 805 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 KATNAL1Q9BW62 490 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 PRKAG3Q9UGI9 489 aa12.28□□□□□ -0.44
COPB1-207ENST00000529866 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.44
COPB1-207ENST00000529866 MYH7P12883 1935 aa12.27□□□□□ -0.44
COPB1-207ENST00000529866 MYH4Q9Y623 1939 aa12.27□□□□□ -0.44
COPB1-207ENST00000529866 H3BQ06 376 aaPredicted RBP12.27□□□□□ -0.45
COPB1-207ENST00000529866 NMT2O60551 498 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 GH1P01241 217 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 AMHP03971 560 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 PTK7Q13308 1070 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 GPNMBQ14956 572 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 DGKDQ16760 1214 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 CLEC4DQ8WXI8 215 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
COPB1-207ENST00000529866 SNX27Q96L92 541 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 MFSD14AQ96MC6 490 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 UPF3BQ9BZI7 483 aaKnown RBP12.27□□□□□ -0.45
COPB1-207ENST00000529866 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
COPB1-207ENST00000529866 GTF2IRD1Q9UHL9 959 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms