RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 BANK1Q8NDB2 785 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 EDAQ92838 391 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 PHOX2BQ99453 314 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 MPHOSPH6Q99547 160 aaKnown RBP13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 HAUS7Q99871 368 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 MYH8P13535 1937 aa13.83□□□□□ -0.2
AMBRA1-207ENST00000529553 MINDY4BA8MYZ0 360 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 H3BNC9 293 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 IRS1P35568 1242 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 HTRA4P83105 476 aaPredicted RBP13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 BAATQ14032 418 aaPredicted RBP13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 PRSS33Q8NF86 280 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 SCFD2Q8WU76 684 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 CTAGE1Q96RT6 745 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 IRF2BPLQ9H1B7 796 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 BOLA2Q9H3K6 86 aa13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 GREB1LQ9C091 1923 aaPredicted RBP13.82□□□□□ -0.2
AMBRA1-207ENST00000529553 SCN5AQ14524 2016 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 NBNO60934 754 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 ICAM1P05362 532 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 CKBP12277 381 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 SMAD2Q15796 467 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 PURBQ96QR8 312 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 CCPG1Q9ULG6 757 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 PRR12Q9ULL5 1215 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 USP34Q70CQ2 3546 aa13.81□□□□□ -0.2
AMBRA1-207ENST00000529553 B4DLN1 442 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 TSPY3P0CV98 308 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 TSPY8P0CW00 308 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 TXNP10599 105 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 GNAT2P19087 354 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 MCCP23508 829 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 MRPL12P52815 198 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 EPC2Q52LR7 807 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 TCEAL5Q5H9L2 206 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 GDF6Q6KF10 455 aaPredicted RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 ITPRIPQ8IWB1 547 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 STK11IPQ8N1F8 1099 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 ANKS1AQ92625 1134 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 PNMA2Q9UL42 364 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 ISY1Q9ULR0 285 aaKnown RBP13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 ZNF318Q5VUA4 2279 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 PLIN4Q96Q06 1357 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 SCN10AQ9Y5Y9 1956 aa13.8□□□□□ -0.2
AMBRA1-207ENST00000529553 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 PRDM1O75626 825 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 AMHP03971 560 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 CHGBP05060 677 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 EDNRBP24530 442 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 PDE4DQ08499 809 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 PTK7Q13308 1070 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 GPM6BQ13491 265 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 CTC1Q2NKJ3 1217 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 IER5LQ5T953 404 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 PBXIP1Q96AQ6 731 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 MUTYHQ9UIF7 546 aa13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
AMBRA1-207ENST00000529553 TET1Q8NFU7 2136 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 LGR5O75473 907 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 LTBRP36941 435 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 TFAP4Q01664 338 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 PDE4BQ07343 736 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 TCF15Q12870 199 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 MKRN4PQ13434 485 aaPredicted RBP13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 EP400NLQ6ZTU2 488 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 PPP1R13LQ8WUF5 828 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 RANBP17Q9H2T7 1088 aaKnown RBP13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 CLDND1Q9NY35 253 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 GTF2IRD1Q9UHL9 959 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 EMSYQ7Z589 1322 aa13.78□□□□□ -0.2
AMBRA1-207ENST00000529553 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 M0R296 226 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 GFRA3O60609 400 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 SNAP25P60880 206 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 TRAF7Q6Q0C0 670 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 KCTD1Q719H9 257 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 SUGP1Q8IWZ8 645 aaKnown RBP13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 TMEM192Q8IY95 271 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 C7orf31Q8N865 590 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 KAT2BQ92831 832 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 COPS5Q92905 334 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 MAF1Q9H063 256 aa13.77□□□□□ -0.21
AMBRA1-207ENST00000529553 TANC1Q9C0D5 1861 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms