RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 CDC42BPBQ9Y5S2 1711 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ABCC3O15438 1527 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 CHD1O14646 1710 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 CCNA1P78396 465 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 PTGDRQ13258 359 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 CABS1Q96KC9 395 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 TRIM56Q9BRZ2 755 aaKnown RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 FAM114A2Q9NRY5 505 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 HESX1Q9UBX0 185 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 LCMT1Q9UIC8 334 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-219ENST00000528621 RFX7Q2KHR2 1363 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 HEG1Q9ULI3 1381 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 SEPT6Q14141 434 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 KRT71Q3SY84 523 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ANKRD42Q8N9B4 389 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 FBXO18Q8NFZ0 1043 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 CDHR1Q96JP9 859 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 TRPM1Q7Z4N2 1603 aa9.28□□□□□ -0.92
CTNND1-219ENST00000528621 ITKQ08881 620 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 LRCH2Q5VUJ6 765 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 SEPT14Q6ZU15 432 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 SESTD1Q86VW0 696 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.92
CTNND1-219ENST00000528621 RILPQ96NA2 401 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 PUS3Q9BZE2 481 aaKnown RBP9.27□□□□□ -0.92
CTNND1-219ENST00000528621 RWDD2AQ9UIY3 292 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 DDX41Q9UJV9 622 aaKnown RBP9.27□□□□□ -0.92
CTNND1-219ENST00000528621 PHLPP2Q6ZVD8 1323 aa9.27□□□□□ -0.92
CTNND1-219ENST00000528621 KDM6BO15054 1643 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 ZNF853P0CG23 659 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 EXOC3L4Q17RC7 722 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 GPT2Q8TD30 523 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 TLR7Q9NYK1 1049 aaKnown RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SH2B2O14492 632 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 DTNBO60941 627 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 AFPP02771 609 aaKnown RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 H2AFZP0C0S5 128 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 NAA25Q14CX7 972 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 H2AFVQ71UI9 128 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 MAP7D3Q8IWC1 876 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 FAM71BQ8TC56 605 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 CCHCR1Q8TD31 782 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 NUF2Q9BZD4 464 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 KIAA1024Q9UPX6 916 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 ATP8B3O60423 1300 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 MMP1P03956 469 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 PCDHB4Q9Y5E5 795 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 PCDHA1Q9Y5I3 950 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 TMEM94Q12767 1356 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 LRRIQ4A6NIV6 560 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 A6NJR5 290 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 BTBD18B2RXH4 712 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SRGAP2BP0DMP2 458 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SH3BGRP55822 239 aaPredicted RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 PTK2Q05397 1052 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SURF1Q15526 300 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 ANKRD20A3Q5VUR7 823 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 RFX6Q8HWS3 928 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 CACTINQ8WUQ7 758 aaKnown RBP9.27□□□□□ -0.93
CTNND1-219ENST00000528621 P2RX5Q93086 422 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 RNF14Q9UBS8 474 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 UNC13BO14795 1591 aa9.27□□□□□ -0.93
CTNND1-219ENST00000528621 SPHKAPQ2M3C7 1700 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 PLEKHG2Q9H7P9 1386 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 NSFP46459 744 aaKnown RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 ARHGEF6Q15052 776 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 RNF10Q8N5U6 811 aaKnown RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 CEP120Q8N960 986 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 DESI2Q9BSY9 194 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 PLEKHA4Q9H4M7 779 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 KANSL2Q9H9L4 492 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 FANCLQ9NW38 375 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 ADD3Q9UEY8 706 aaKnown RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 MED7O43513 233 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 IGBP1P78318 339 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 SATB1Q01826 763 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 PROSER3Q2NL68 480 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 RSPH3Q86UC2 560 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 FAM160B2Q86V87 743 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 NT5C1BQ96P26 610 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 KLHL14Q9P2G3 628 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 ARHGEF37A1IGU5 675 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 PTPREP23469 700 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 DYNLL1P63167 89 aaKnown RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 BFSP1Q12934 665 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 CC2D2BQ6DHV5 1058 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 KCTD1Q719H9 257 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 CTAGE3PQ8IX95 158 aa9.26□□□□□ -0.93
CTNND1-219ENST00000528621 NSUN7Q8NE18 718 aaKnown RBP9.26□□□□□ -0.93
CTNND1-219ENST00000528621 SCYL1Q96KG9 808 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms