RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 USP17L20D6RJB6 530 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 GTPBP6O43824 516 aaPredicted RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 TXKP42681 527 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 ECE1P42892 770 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 UBASH3AP57075 661 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 USP17L24Q0WX57 530 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 NBPF9Q3BBW0 867 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 CIAPIN1Q6FI81 312 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 USP17L6PQ6QN14 398 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 MIGA2Q7L4E1 593 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 TMC6Q7Z403 805 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 GMCL1P1Q8NEA9 526 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 ACER1Q8TDN7 264 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 NFKBIEO00221 500 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 WNT10BO00744 389 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 SLC37A4O43826 429 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 BMP3P12645 472 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 STX17P56962 302 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 R3HDM1Q15032 1099 aaKnown RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 TEX35Q5T0J7 233 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 CABP7Q86V35 215 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 GMCL1Q96IK5 515 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 AK8Q96MA6 479 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 ZCCHC17Q9NP64 241 aaKnown RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
SOX6-210ENST00000528252 JRKLQ9Y4A0 524 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 MYH4Q9Y623 1939 aa9.24□□□□□ -0.93
SOX6-210ENST00000528252 ERCC5P28715 1186 aaPredicted RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 CALCRLQ16602 461 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 SRLQ86TD4 932 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 PACS2Q86VP3 889 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 LRRC15Q8TF66 581 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 MTMR9Q96QG7 549 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 BCS1LQ9Y276 419 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 RRP15Q9Y3B9 282 aaKnown RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 COL2A1P02458 1487 aaPredicted RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 PPP1R3GB7ZBB8 358 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 MYO1BO43795 1136 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 PLCG1P19174 1290 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 PTPN14Q15678 1187 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 PTPN21Q16825 1174 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 SYDE2Q5VT97 1194 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 FKBP1CQ5VVH2 108 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 CCDC125Q86Z20 511 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 MTMR14Q8NCE2 650 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 TRMT1Q9NXH9 659 aaKnown RBP9.23□□□□□ -0.93
SOX6-210ENST00000528252 ZBTB21Q9ULJ3 1066 aa9.23□□□□□ -0.93
SOX6-210ENST00000528252 RPN1P04843 607 aaKnown RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 ZNF18P17022 549 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 USH1GQ495M9 461 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 KIAA1755Q5JYT7 1200 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 NYAP1Q6ZVC0 841 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 IGSF22Q8N9C0 903 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 AMNQ9BXJ7 453 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 MYOZ2Q9NPC6 264 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 CBFA2T2O43439 604 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 COBLO75128 1261 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 EGFRP00533 1210 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 VASPP50552 380 aaPredicted RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 FAM83AQ86UY5 434 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 FBXO11Q86XK2 927 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 ZBED3Q96IU2 234 aaPredicted RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 MMTAG2Q9BU76 263 aaKnown RBP9.22□□□□□ -0.93
SOX6-210ENST00000528252 ARHGEF10LQ9HCE6 1279 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 BCCIPQ9P287 314 aaKnown RBP eCLIP9.22□□□□□ -0.93
SOX6-210ENST00000528252 IMPACTQ9P2X3 320 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 LRWD1Q9UFC0 647 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 MAPK8IP1Q9UQF2 711 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 TMX2Q9Y320 296 aa9.22□□□□□ -0.93
SOX6-210ENST00000528252 SKILP12757 684 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 GSDMDP57764 484 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 DHX8Q14562 1220 aaKnown RBP9.21□□□□□ -0.93
SOX6-210ENST00000528252 ZYXQ15942 572 aaKnown RBP9.21□□□□□ -0.93
SOX6-210ENST00000528252 SPATA1Q5VX52 437 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 PPP4R3AQ6IN85 833 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 CCDC84Q86UT8 332 aaPredicted RBP9.21□□□□□ -0.93
SOX6-210ENST00000528252 GJA10Q969M2 543 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 UIMC1Q96RL1 719 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 INTS13Q9NVM9 706 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 DDX25Q9UHL0 483 aaKnown RBP9.21□□□□□ -0.93
SOX6-210ENST00000528252 GDAQ9Y2T3 454 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 CEP83Q9Y592 693 aa9.21□□□□□ -0.93
SOX6-210ENST00000528252 POTEMA6NI47 508 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 MEIS2O14770 477 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 SEC31AO94979 1220 aaKnown RBP9.21□□□□□ -0.94
SOX6-210ENST00000528252 CCDC172P0C7W6 258 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 RASA3Q14644 834 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 TNIP1Q15025 636 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 TTC31Q49AM3 519 aaPredicted RBP9.21□□□□□ -0.94
SOX6-210ENST00000528252 BTNL9Q6UXG8 535 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 GLT8D2Q9H1C3 349 aa9.21□□□□□ -0.94
SOX6-210ENST00000528252 RMND1Q9NWS8 449 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms