RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 HPDP32754 393 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 RASSF7Q02833 373 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 ITGB3BPQ13352 177 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 PREPLQ4J6C6 727 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 KLHDC7AQ5VTJ3 777 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 RRAGAQ7L523 313 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 GPIHBP1Q8IV16 184 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 BLIDQ8IZY5 108 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 ARFGAP2Q8N6H7 521 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC114Q96M63 670 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 SLC40A1Q9NP59 571 aa16.23■□□□□ 0.19
CAPN1-214ENST00000528165 PPANQ9NQ55 473 aaKnown RBP16.23■□□□□ 0.19
CAPN1-214ENST00000528165 BAZ2BQ9UIF8 2168 aaKnown RBP16.22■□□□□ 0.19
CAPN1-214ENST00000528165 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 PJA2O43164 708 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 PPP1R2P41236 205 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 BCAMP50895 628 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 BANK1Q8NDB2 785 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 MTMR8Q96EF0 704 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 CCSER1Q9C0I3 900 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 MCM8Q9UJA3 840 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 ALS2Q96Q42 1657 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 CYP2D7A0A087X1C5 515 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 LRRC53A6NM62 1247 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 EPHB6O15197 1021 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 ELF1P32519 619 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 STK4Q13043 487 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 RNF10Q8N5U6 811 aaKnown RBP16.22■□□□□ 0.19
CAPN1-214ENST00000528165 CYFIP2Q96F07 1278 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 ACTR5Q9H9F9 607 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-214ENST00000528165 PLAAQ9Y263 795 aa16.22■□□□□ 0.19
CAPN1-214ENST00000528165 TNS2Q63HR2 1409 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 VEGFAP15692 232 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-214ENST00000528165 DNA2P51530 1060 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 ASIC1P78348 528 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 VWA3BQ502W6 1294 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC84Q86UT8 332 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-214ENST00000528165 KRT12Q99456 494 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 SIK3Q9Y2K2 1263 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 CCDC194A0A1B0GVG4 234 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 GFPT1Q06210 699 aaPredicted RBP16.21■□□□□ 0.19
CAPN1-214ENST00000528165 C6orf89Q6UWU4 347 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 CASKIN2Q8WXE0 1202 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 NDST4Q9H3R1 872 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 CUEDC2Q9H467 287 aa16.21■□□□□ 0.19
CAPN1-214ENST00000528165 FAM205AQ6ZU69 1335 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 NKRFO15226 690 aaKnown RBP eCLIP16.2■□□□□ 0.18
CAPN1-214ENST00000528165 RASGRP4Q8TDF6 673 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 MAGEF1Q9HAY2 307 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 ABCF2Q9UG63 623 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 ODF2LQ9ULJ1 636 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 CLGNO14967 610 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 STARD3NLO95772 234 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 FCER1AP12319 257 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 SLC1A4P43007 532 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 SNCBQ16143 134 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 N4BP2L2Q92802 583 aaPredicted RBP16.2■□□□□ 0.18
CAPN1-214ENST00000528165 DDX17Q92841 729 aaKnown RBP16.2■□□□□ 0.18
CAPN1-214ENST00000528165 TRIM9Q9C026 710 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 TMEM60Q9H2L4 133 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 MYH3P11055 1940 aa16.2■□□□□ 0.18
CAPN1-214ENST00000528165 GCOM1H8Y6P7 765 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-214ENST00000528165 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 PLCG1P19174 1290 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 DUOX1Q9NRD9 1551 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 GRID2IPA4D2P6 1211 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 GMNCA6NCL1 334 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 ZPR1O75312 459 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
CAPN1-214ENST00000528165 TDRD12Q587J7 1177 aaKnown RBP16.19■□□□□ 0.18
CAPN1-214ENST00000528165 CACNA2D4Q7Z3S7 1137 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 CCDC50Q8IVM0 306 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 VEZTQ9HBM0 779 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 TMBIM4Q9HC24 238 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 ARAP2Q8WZ64 1704 aa16.19■□□□□ 0.18
CAPN1-214ENST00000528165 PCP11498 1178 aaKnown RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 HSPA9P38646 679 aaKnown RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 HLTFQ14527 1009 aaKnown RBP eCLIP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 WLSQ5T9L3 541 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 CNNM4Q6P4Q7 775 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 PARP9Q8IXQ6 854 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 LRRC15Q8TF66 581 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TCP11L1Q9NUJ3 509 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 ADAMTSL3P82987 1691 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 PLCH1Q4KWH8 1693 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TMCO5BA8MYB1 307 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 NMT2O60551 498 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 PALMO75781 387 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 ATP2B2Q01814 1243 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 CDC37Q16543 378 aaPredicted RBP16.18■□□□□ 0.18
CAPN1-214ENST00000528165 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 TOM1L2Q6ZVM7 507 aa16.18■□□□□ 0.18
CAPN1-214ENST00000528165 CABP7Q86V35 215 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms