RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 SAMD3Q8N6K7 520 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 LENG1Q96BZ8 264 aaPredicted RBP20.48■□□□□ 0.87
NXF1-206ENST00000527902 ABHD16BQ9H3Z7 469 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 PSTPIP2Q9H939 334 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 PXMP2Q9NR77 195 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 DDX20Q9UHI6 824 aaKnown RBP20.48■□□□□ 0.87
NXF1-206ENST00000527902 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
NXF1-206ENST00000527902 LOC102724159A0A0B4J2E5 919 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 hCG_1984214I3L0E3 225 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 PIK3CDO00329 1044 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 ADAMTS3O15072 1205 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 EIF2AK2P19525 551 aaKnown RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 SSRP1Q08945 709 aaKnown RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 PWP2Q15269 919 aaKnown RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 UBE2SQ16763 222 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 ZNF713Q8N859 430 aaPredicted RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 IL31RAQ8NI17 732 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 NSUN6Q8TEA1 469 aaKnown RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 AIFM3Q96NN9 605 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 PDGFCQ9NRA1 345 aa20.47■□□□□ 0.87
NXF1-206ENST00000527902 RBM27Q9P2N5 1060 aaKnown RBP20.47■□□□□ 0.87
NXF1-206ENST00000527902 AKAP17AQ02040 695 aaKnown RBP20.46■□□□□ 0.87
NXF1-206ENST00000527902 TAPT1Q6NXT6 567 aa20.46■□□□□ 0.87
NXF1-206ENST00000527902 FRMPD4Q14CM0 1322 aa20.46■□□□□ 0.87
NXF1-206ENST00000527902 PTGS1P23219 599 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 PDE4DQ08499 809 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 CCDC144BQ3MJ40 725 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 ARHGEF16Q5VV41 709 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 CPLX2Q6PUV4 134 aaKnown RBP20.45■□□□□ 0.86
NXF1-206ENST00000527902 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 SMARCC2Q8TAQ2 1214 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 PDCD2LQ9BRP1 358 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 RIC8AQ9NPQ8 531 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 VPS54Q9P1Q0 977 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 STK36Q9NRP7 1315 aa20.45■□□□□ 0.86
NXF1-206ENST00000527902 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.44■□□□□ 0.86
NXF1-206ENST00000527902 SMCO2A6NFE2 343 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 DEXIO95424 95 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 NR3C2P08235 984 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 FDPSP14324 419 aaKnown RBP20.44■□□□□ 0.86
NXF1-206ENST00000527902 AKR1A1P14550 325 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 ADCYAP1R1P41586 468 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 MNX1P50219 401 aaPredicted RBP20.44■□□□□ 0.86
NXF1-206ENST00000527902 ADCY7P51828 1080 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 PGM5Q15124 567 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 NSUN7Q8NE18 718 aaKnown RBP20.44■□□□□ 0.86
NXF1-206ENST00000527902 CUL5Q93034 780 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 IWS1Q96ST2 819 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 VTA1Q9NP79 307 aa20.44■□□□□ 0.86
NXF1-206ENST00000527902 ESYT2A0FGR8 921 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 ST18O60284 1047 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 JAK2O60674 1132 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 MSCO60682 206 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 CDKL5O76039 1030 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 TFRCP02786 760 aaKnown RBP20.43■□□□□ 0.86
NXF1-206ENST00000527902 IFFO2Q5TF58 517 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 CCDC83Q8IWF9 413 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 ZFP91Q96JP5 570 aaPredicted RBP20.43■□□□□ 0.86
NXF1-206ENST00000527902 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 FAM184BQ9ULE4 1060 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 MYH7BA7E2Y1 1941 aa20.43■□□□□ 0.86
NXF1-206ENST00000527902 CLK2P49760 499 aaKnown RBP20.42■□□□□ 0.86
NXF1-206ENST00000527902 ZSCAN31Q96LW9 406 aaPredicted RBP20.42■□□□□ 0.86
NXF1-206ENST00000527902 TMEM260Q9NX78 707 aa20.42■□□□□ 0.86
NXF1-206ENST00000527902 RBM47A0AV96 593 aaKnown RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 RGS20O76081 388 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 MYCLP12524 364 aaPredicted RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 SMPD1P17405 629 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 MRPL12P52815 198 aaKnown RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 IRX5P78411 483 aaPredicted RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 STXBP2Q15833 593 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 GJC2Q5T442 439 aaPredicted RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 UBE2Q1Q7Z7E8 422 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 VSIG10LQ86VR7 867 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 DIS3LQ8TF46 1054 aaKnown RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 PGBD1Q96JS3 809 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 MPHOSPH6Q99547 160 aaKnown RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 GJB4Q9NTQ9 266 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 ORC3Q9UBD5 711 aaPredicted RBP20.41■□□□□ 0.86
NXF1-206ENST00000527902 PCDHA6Q9UN73 950 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 PCDHA8Q9Y5H6 950 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 DOCK5Q9H7D0 1870 aa20.41■□□□□ 0.86
NXF1-206ENST00000527902 B4DLN1 442 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 ARIH2O95376 493 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 PGK1P00558 417 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 RARBP10826 455 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 MRPS9P82933 396 aaKnown RBP20.4■□□□□ 0.86
NXF1-206ENST00000527902 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 NPY5RQ15761 445 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 CCDC12Q8WUD4 166 aaPredicted RBP20.4■□□□□ 0.86
NXF1-206ENST00000527902 XPNPEP3Q9NQH7 507 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 SH3GLB2Q9NR46 395 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 SH2B1Q9NRF2 756 aaPredicted RBP20.4■□□□□ 0.86
NXF1-206ENST00000527902 SYNRGQ9UMZ2 1314 aa20.4■□□□□ 0.86
NXF1-206ENST00000527902 GNEQ9Y223 722 aaKnown RBP20.4■□□□□ 0.86
NXF1-206ENST00000527902 ALPK3Q96L96 1907 aa20.39■□□□□ 0.86
NXF1-206ENST00000527902 MYADML2A6NDP7 307 aa20.39■□□□□ 0.85
NXF1-206ENST00000527902 ADAMTS4O75173 837 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms