RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 RBM27Q9P2N5 1060 aaKnown RBP30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 SNX14Q9Y5W7 946 aa30.52■■■□□ 2.48
TSPAN4-217ENST00000527644 ELP1O95163 1332 aa30.51■■■□□ 2.48
TSPAN4-217ENST00000527644 ARHGEF16Q5VV41 709 aa30.51■■■□□ 2.47
TSPAN4-217ENST00000527644 PIBF1Q8WXW3 757 aa30.51■■■□□ 2.47
TSPAN4-217ENST00000527644 PLEKHA8P1O95397 391 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 BEX3Q00994 111 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 FSCN1Q16658 493 aaKnown RBP30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 TMEM63BQ5T3F8 832 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 MICU3Q86XE3 530 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 SCFD2Q8WU76 684 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 GDF15Q99988 308 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 PRKAG2Q9UGJ0 569 aa30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 SEC63Q9UGP8 760 aaKnown RBP30.5■■■□□ 2.47
TSPAN4-217ENST00000527644 GCOM1H8Y6P7 765 aaPredicted RBP30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 ZEB2O60315 1214 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 POLR2MP0CAP2 368 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 STXBP2Q15833 593 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 APOA5Q6Q788 366 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 RAB11FIP4Q86YS3 637 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 JAKMIP1Q96N16 626 aaKnown RBP30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 PXMP2Q9NR77 195 aa30.49■■■□□ 2.47
TSPAN4-217ENST00000527644 NKRFO15226 690 aaKnown RBP eCLIP30.48■■■□□ 2.472e-6■■□□□ 14.4
TSPAN4-217ENST00000527644 BMP8BP34820 402 aa30.48■■■□□ 2.47
TSPAN4-217ENST00000527644 MAGEA10P43363 369 aaPredicted RBP30.48■■■□□ 2.47
TSPAN4-217ENST00000527644 TMTC3Q6ZXV5 915 aa30.48■■■□□ 2.47
TSPAN4-217ENST00000527644 CMTR1Q8N1G2 835 aaKnown RBP30.48■■■□□ 2.47
TSPAN4-217ENST00000527644 TRIOBPQ9H2D6 2365 aa30.48■■■□□ 2.47
TSPAN4-217ENST00000527644 EIF2AK2P19525 551 aaKnown RBP30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 PTGS1P23219 599 aa30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 HOXA13P31271 388 aaPredicted RBP30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 TLE2Q04725 743 aa30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 PPP2R5BQ15173 497 aa30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 VTI1AQ96AJ9 217 aa30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 RBM28Q9NW13 759 aaKnown RBP30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 BRPF3Q9ULD4 1205 aa30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 RANBP2P49792 3224 aaKnown RBP30.47■■■□□ 2.47
TSPAN4-217ENST00000527644 A0A1W2PPC1 479 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 ZBTB43O43298 467 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 CABYRO75952 493 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 NR3C2P08235 984 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 FGD1P98174 961 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 TTLL4Q14679 1199 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 BLOC1S2Q6QNY1 142 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 TOX2Q96NM4 488 aa30.46■■■□□ 2.47
TSPAN4-217ENST00000527644 EIF3JO75822 258 aaKnown RBP30.45■■■□□ 2.47
TSPAN4-217ENST00000527644 TXNP10599 105 aaKnown RBP30.45■■■□□ 2.47
TSPAN4-217ENST00000527644 PSMA5P28066 241 aa30.45■■■□□ 2.47
TSPAN4-217ENST00000527644 ANKRD33Q7Z3H0 272 aa30.45■■■□□ 2.47
TSPAN4-217ENST00000527644 A0A0U1RQG5 324 aaPredicted RBP30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 CPA1P15085 419 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 RCAN1P53805 252 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 OR6J1Q8NGC5 347 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 PDCD2LQ9BRP1 358 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 USP26Q9BXU7 913 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 PDLIM7Q9NR12 457 aa30.44■■■□□ 2.46
TSPAN4-217ENST00000527644 KLF18A0A0U1RQI7 1052 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 PQBP1O60828 265 aaKnown RBP30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 CDK7P50613 346 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 RTN1Q16799 776 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 CXCL17Q6UXB2 119 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 SEPT14Q6ZU15 432 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 CCDC82Q8N4S0 544 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 LBHD1Q9BQE6 289 aaPredicted RBP30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 PRDM5Q9NQX1 630 aaPredicted RBP30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 MROH7Q68CQ1 1323 aa30.43■■■□□ 2.46
TSPAN4-217ENST00000527644 DCDC2CA8MYV0 355 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 ARVCFO00192 962 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 CLTBP09497 229 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 RPS6KB1P23443 525 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 CPT1AP50416 773 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 BRDTQ58F21 947 aaPredicted RBP30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 CCDC62Q6P9F0 684 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 Q6ZUG5 572 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 FCHSD1Q86WN1 690 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 FBXL16Q8N461 479 aa30.42■■■□□ 2.46
TSPAN4-217ENST00000527644 ARIH2O95376 493 aa30.41■■■□□ 2.46
TSPAN4-217ENST00000527644 MDM2Q00987 491 aaPredicted RBP30.41■■■□□ 2.46
TSPAN4-217ENST00000527644 PGM5Q15124 567 aa30.41■■■□□ 2.46
TSPAN4-217ENST00000527644 VSIG10LQ86VR7 867 aa30.41■■■□□ 2.46
TSPAN4-217ENST00000527644 GOLGA8AA7E2F4 631 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 GOLGA8BA8MQT2 603 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 MYCLP12524 364 aaPredicted RBP30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 CASTP20810 708 aaKnown RBP30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 SH3RF1Q7Z6J0 888 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 COPS5Q92905 334 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 CUL5Q93034 780 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 SEZ6LQ9BYH1 1024 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 UBE2OQ9C0C9 1292 aaKnown RBP30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 POLR3EQ9NVU0 708 aa30.4■■■□□ 2.46
TSPAN4-217ENST00000527644 TRIM43BA6NCK2 446 aa30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 PIK3CDO00329 1044 aa30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 BRF1Q92994 677 aa30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 TRIM43Q96BQ3 446 aaPredicted RBP30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 PCDH10Q9P2E7 1040 aa30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 NAP1L2Q9ULW6 460 aaPredicted RBP30.39■■■□□ 2.46
TSPAN4-217ENST00000527644 hCG_1642624A0A1W2PR95 340 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 A6NJR5 290 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 CCND2P30279 289 aa30.38■■■□□ 2.45
TSPAN4-217ENST00000527644 APOBRQ0VD83 1088 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms