RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 NSMCE1Q8WV22 266 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 CUL5Q93034 780 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 RBM41Q96IZ5 413 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 ATP6V1G3Q96LB4 118 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 CCDC43Q96MW1 224 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 SPAG5Q96R06 1193 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 POLD4Q9HCU8 107 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 SEC31BQ9NQW1 1179 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 WDR37Q9Y2I8 494 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 MYO5AQ9Y4I1 1855 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 ECM29Q5VYK3 1845 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 VIL1P09327 827 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 RPL13P26373 211 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 COPB1P53618 953 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 ELF3P78545 371 aaPredicted RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 TMEM62Q0P6H9 643 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 ZMYM1Q5SVZ6 1142 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 CRELD2Q6UXH1 353 aaPredicted RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 PACS1Q6VY07 963 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 RNF168Q8IYW5 571 aaPredicted RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 IQCKQ8N0W5 287 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 ARFGAP2Q8N6H7 521 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 NACC2Q96BF6 587 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 AIFM3Q96NN9 605 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 SENP2Q9HC62 589 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 PPANQ9NQ55 473 aaKnown RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 DBF4Q9UBU7 674 aaPredicted RBP8.25□□□□□ -1.09
SOX6-208ENST00000527619 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
SOX6-208ENST00000527619 MST1RQ04912 1400 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 PRR36Q9H6K5 1346 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 GMNCA6NCL1 334 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 M0R2C6 588 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 SMNDC1O75940 238 aaKnown RBP eCLIP8.24□□□□□ -1.09
SOX6-208ENST00000527619 GHRP10912 638 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 PTPREP23469 700 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 VAV2P52735 878 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 HAUS3Q68CZ6 603 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 MIS18BP1Q6P0N0 1132 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 SPATA4Q8NEY3 305 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 LINS1Q8NG48 757 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 TBC1D31Q96DN5 1066 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 CENPOQ9BU64 300 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 EXOC1Q9NV70 894 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 FBXO2Q9UK22 296 aaPredicted RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 SNX12Q9UMY4 172 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 C15orf41Q9Y2V0 281 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 TMEM94Q12767 1356 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 SH2B2O14492 632 aaPredicted RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 CEP104O60308 925 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 GCLCP48506 637 aaPredicted RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 SPAG1Q07617 926 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 TFCP2Q12800 502 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 MYO1EQ12965 1108 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 TRIM29Q14134 588 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 ZNF579Q8NAF0 562 aaKnown RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 CCHCR1Q8TD31 782 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 STAMBPL1Q96FJ0 436 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 SEC16BQ96JE7 1060 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 NEUROD6Q96NK8 337 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 ALS2CR12Q96Q35 445 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 PURBQ96QR8 312 aaKnown RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 NUP58Q9BVL2 599 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 RSPH9Q9H1X1 276 aaPredicted RBP8.24□□□□□ -1.09
SOX6-208ENST00000527619 VPS16Q9H269 839 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 BAIAP2L1Q9UHR4 511 aa8.24□□□□□ -1.09
SOX6-208ENST00000527619 STRCP1A6NGW2 1772 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 ERICH2A1L162 156 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 C5orf60A6NFR6 353 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 PPP1R3GB7ZBB8 358 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 BOLA2-SMG1P6H3BVE0 249 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 LIN7AO14910 233 aaPredicted RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 TRIM21P19474 475 aaKnown RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 CYLC1P35663 651 aaPredicted RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 ROR2Q01974 943 aaKnown RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 GRIN1Q05586 938 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 TTF1Q15361 905 aaPredicted RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 MB21D2Q8IYB1 491 aaPredicted RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 CACNA2D3Q8IZS8 1091 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 MREGQ8N565 214 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 SLC43A3Q8NBI5 491 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 SLC35B4Q969S0 331 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 HVCN1Q96D96 273 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 DNAJC7Q99615 494 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 SLC7A5P2Q9GIP4 190 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 CORO1CQ9ULV4 474 aaPredicted RBP8.23□□□□□ -1.09
SOX6-208ENST00000527619 USP6P35125 1406 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 MAST3O60307 1309 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 ACEP12821 1306 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 PDLIM1O00151 329 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 TRAPPC3O43617 180 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 PRLRP16471 622 aa8.23□□□□□ -1.09
SOX6-208ENST00000527619 PAPOLAP51003 745 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms