RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 FAM160B2Q86V87 743 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 FBXO16Q8IX29 292 aaPredicted RBP24.44■■□□□ 1.5
PKP3-205ENST00000527442 VWCEQ96DN2 955 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 GMCL1Q96IK5 515 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 TRERF1Q96PN7 1200 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 UPF3BQ9BZI7 483 aaKnown RBP24.44■■□□□ 1.5
PKP3-205ENST00000527442 CYP46A1Q9Y6A2 500 aa24.44■■□□□ 1.5
PKP3-205ENST00000527442 MYOGP15173 224 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 SNAP25P60880 206 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 TFAP4Q01664 338 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 MUM1L1Q5H9M0 696 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 TAPT1Q6NXT6 567 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 EEPD1Q7L9B9 569 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 TRANK1O15050 2925 aa24.43■■□□□ 1.5
PKP3-205ENST00000527442 B4E1Z4 1266 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 SLC1A4P43007 532 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 COL9A3Q14050 684 aaPredicted RBP24.42■■□□□ 1.5
PKP3-205ENST00000527442 TKFCQ3LXA3 575 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 PPP2R2DQ66LE6 453 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 DHX32Q7L7V1 743 aaKnown RBP24.42■■□□□ 1.5
PKP3-205ENST00000527442 RASGRP2Q7LDG7 609 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 CHURC1Q8WUH1 139 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 SCLYQ96I15 445 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 TTC14Q96N46 770 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 CYP39A1Q9NYL5 469 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 SLC4A7Q9Y6M7 1214 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 TANC1Q9C0D5 1861 aa24.42■■□□□ 1.5
PKP3-205ENST00000527442 NEK4P51957 841 aa24.41■■□□□ 1.5
PKP3-205ENST00000527442 EXOSC10Q01780 885 aaKnown RBP24.41■■□□□ 1.5
PKP3-205ENST00000527442 KCTD1Q719H9 257 aa24.41■■□□□ 1.5
PKP3-205ENST00000527442 ESR2Q92731 530 aa24.41■■□□□ 1.5
PKP3-205ENST00000527442 SEZ6LQ9BYH1 1024 aa24.41■■□□□ 1.5
PKP3-205ENST00000527442 INCENPQ9NQS7 918 aa24.41■■□□□ 1.5
PKP3-205ENST00000527442 ST18O60284 1047 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 ZEB2O60315 1214 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 MCM5P33992 734 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 IQSEC1Q6DN90 963 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 MICALL1Q8N3F8 863 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 NECAB3Q96P71 396 aaPredicted RBP24.4■■□□□ 1.5
PKP3-205ENST00000527442 PURBQ96QR8 312 aaKnown RBP24.4■■□□□ 1.5
PKP3-205ENST00000527442 MTA3Q9BTC8 594 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 ALDH8A1Q9H2A2 487 aaPredicted RBP24.4■■□□□ 1.5
PKP3-205ENST00000527442 PRR12Q9ULL5 1215 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 PCDHA11Q9Y5I1 949 aa24.4■■□□□ 1.5
PKP3-205ENST00000527442 ZBBXA8MT70 800 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 KDM4AO75164 1064 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 CPA1P15085 419 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 ANTXR2P58335 489 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 RRP12Q5JTH9 1297 aaKnown RBP24.39■■□□□ 1.49
PKP3-205ENST00000527442 RPUSD2Q8IZ73 545 aaKnown RBP24.39■■□□□ 1.49
PKP3-205ENST00000527442 FBXL16Q8N461 479 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 VTA1Q9NP79 307 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 TOMM22Q9NS69 142 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 Q9Y3F1 56 aa24.39■■□□□ 1.49
PKP3-205ENST00000527442 PLA2G6O60733 806 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 ANP32AP39687 249 aaKnown RBP24.38■■□□□ 1.49
PKP3-205ENST00000527442 NSMFQ6X4W1 530 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 CYB5R4Q7L1T6 521 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 SNX21Q969T3 373 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 AGXT2Q9BYV1 514 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 STX8Q9UNK0 236 aa24.38■■□□□ 1.49
PKP3-205ENST00000527442 SCN10AQ9Y5Y9 1956 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 PRC1O43663 620 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 ATP2A2P16615 1042 aaKnown RBP24.37■■□□□ 1.49
PKP3-205ENST00000527442 TFF2Q03403 129 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 TTLL4Q14679 1199 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 RCSD1Q6JBY9 416 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 MORC4Q8TE76 937 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 PDRG1Q9NUG6 133 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 TRMT13Q9NUP7 481 aaKnown RBP24.37■■□□□ 1.49
PKP3-205ENST00000527442 ZSWIM5Q9P217 1185 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 CCPG1Q9ULG6 757 aa24.37■■□□□ 1.49
PKP3-205ENST00000527442 RANBP6O60518 1105 aaKnown RBP24.36■■□□□ 1.49
PKP3-205ENST00000527442 NMT2O60551 498 aa24.36■■□□□ 1.49
PKP3-205ENST00000527442 CYP2C9P11712 490 aa24.36■■□□□ 1.49
PKP3-205ENST00000527442 TMEM87BQ96K49 555 aa24.36■■□□□ 1.49
PKP3-205ENST00000527442 TSPYL2Q9H2G4 693 aaPredicted RBP24.36■■□□□ 1.49
PKP3-205ENST00000527442 IL17RBQ9NRM6 502 aa24.36■■□□□ 1.49
PKP3-205ENST00000527442 PRRC2BQ5JSZ5 2229 aaKnown RBP24.36■■□□□ 1.49
PKP3-205ENST00000527442 XIRP2A4UGR9 3374 aa24.36■■□□□ 1.49
PKP3-205ENST00000527442 PTPRSQ13332 1948 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 COL4A4P53420 1690 aaPredicted RBP24.35■■□□□ 1.49
PKP3-205ENST00000527442 RFXAPO00287 272 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 BMP1P13497 986 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 DUSP28Q4G0W2 176 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 TCEANC2Q96MN5 208 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 MTMR7Q9Y216 660 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 TNKSO95271 1327 aa24.35■■□□□ 1.49
PKP3-205ENST00000527442 TSPY2A6NKD2 308 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 CD2BP2O95400 341 aaKnown RBP24.34■■□□□ 1.49
PKP3-205ENST00000527442 CA3P07451 260 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 MCM2P49736 904 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 AK2P54819 239 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 DEFB128Q7Z7B8 93 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 POLR3EQ9NVU0 708 aa24.34■■□□□ 1.49
PKP3-205ENST00000527442 SH2B2O14492 632 aaPredicted RBP24.33■■□□□ 1.49
PKP3-205ENST00000527442 ICAM1P05362 532 aa24.33■■□□□ 1.49
PKP3-205ENST00000527442 PFKMP08237 780 aa24.33■■□□□ 1.49
PKP3-205ENST00000527442 ALDH5A1P51649 535 aaPredicted RBP24.33■■□□□ 1.49
PKP3-205ENST00000527442 KCNQ1P51787 676 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms