RNA–Protein interactions for RNA: ENST00000527079.2

PTPMT1-204, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best)

Gene PTPMT1, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-204ENST00000527079 KRT86O43790 486 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 PSMD2Q13200 908 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 GUF1Q8N442 669 aaKnown RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 COA7Q96BR5 231 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 PNMA5Q96PV4 448 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 GBP3Q9H0R5 595 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 SERPINB13Q9UIV8 391 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 GUCA1BQ9UMX6 200 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 RASSF10A6NK89 507 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 MAP2K7O14733 419 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 AKR1B1P15121 316 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 HERVK_113P62684 666 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 ZNF543Q08ER8 600 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 PICALMQ13492 652 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 SMC1AQ14683 1233 aaKnown RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 CCDC122Q5T0U0 273 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 KRT79Q5XKE5 535 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 DPP8Q6V1X1 898 aaPredicted RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 TRAPPC11Q7Z392 1133 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 LRRC47Q8N1G4 583 aaKnown RBP12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 RAD54LQ92698 747 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 SEMA6BQ9H3T3 888 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
PTPMT1-204ENST00000527079 MYMKA6NI61 221 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 SLC37A4O43826 429 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 TDP2O95551 362 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 CLK2P49760 499 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 MRPL12P52815 198 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 MCM6Q14566 821 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 SEPT2Q15019 361 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 TMEM119Q4V9L6 283 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 PAPD7Q5XG87 772 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 KIAA1328Q86T90 577 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 PCMTD1Q96MG8 357 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 NAP1L4Q99733 375 aaKnown RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 NHEJ1Q9H9Q4 299 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 SLC39A2Q9NP94 309 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 EDIL3O43854 480 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 DDR1Q08345 913 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 VWA3BQ502W6 1294 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 BEND6Q5SZJ8 279 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 HDXQ7Z353 690 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 ADGRF4Q8IZF3 695 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 SNX29Q8TEQ0 813 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 CUL5Q93034 780 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 TSGA10Q9BZW7 698 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 GREB1LQ9C091 1923 aaPredicted RBP12.03□□□□□ -0.48
PTPMT1-204ENST00000527079 MYH4Q9Y623 1939 aa12.02□□□□□ -0.48
PTPMT1-204ENST00000527079 SLC26A4O43511 780 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 GPS2Q13227 327 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 MAN2A1Q16706 1144 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 GPCPD1Q9NPB8 672 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 DDX4Q9NQI0 724 aaKnown RBP12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 SAR1BQ9Y6B6 198 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 ANO9A1A5B4 782 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 ZBTB5O15062 677 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 HLA-DOAP06340 250 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 TNNI2P48788 182 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 EHHADHQ08426 723 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 TAF3Q5VWG9 929 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 WDR93Q6P2C0 686 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 MTMR8Q96EF0 704 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 PNKPQ96T60 521 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 TSG101Q99816 390 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 ZC3H12CQ9C0D7 883 aaKnown RBP12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 NDST4Q9H3R1 872 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 DDX25Q9UHL0 483 aaKnown RBP12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 PLAGL2Q9UPG8 496 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 MYH7BA7E2Y1 1941 aa12.02□□□□□ -0.49
PTPMT1-204ENST00000527079 POTEMA6NI47 508 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 OAS2P29728 719 aaKnown RBP12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 SHMT1P34896 483 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 KLK7P49862 253 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 CKAP4Q07065 602 aaKnown RBP12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 ARHGAP27Q6ZUM4 889 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 PROM2Q8N271 834 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 DDX12PQ92771 950 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 EEF2KMTQ96G04 330 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 CCDC17Q96LX7 622 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 CCDC42Q96M95 316 aa12.01□□□□□ -0.49
PTPMT1-204ENST00000527079 PURBQ96QR8 312 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms