RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 AGPAT5Q9NUQ2 364 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 ARGLU1Q9NWB6 273 aaPredicted RBP19.64■□□□□ 0.74
USH1C-205ENST00000527020 PCDHAC2Q9Y5I4 1007 aa19.64■□□□□ 0.74
USH1C-205ENST00000527020 MPHOSPH10O00566 681 aaKnown RBP19.64■□□□□ 0.73
USH1C-205ENST00000527020 CRKP46108 304 aa19.64■□□□□ 0.73
USH1C-205ENST00000527020 MEA1Q16626 185 aa19.64■□□□□ 0.73
USH1C-205ENST00000527020 SHROOM1Q2M3G4 852 aaPredicted RBP19.64■□□□□ 0.73
USH1C-205ENST00000527020 GPATCH4Q5T3I0 446 aaKnown RBP19.64■□□□□ 0.73
USH1C-205ENST00000527020 UTP14CQ5TAP6 766 aaKnown RBP19.64■□□□□ 0.73
USH1C-205ENST00000527020 UNC13DQ70J99 1090 aa19.64■□□□□ 0.73
USH1C-205ENST00000527020 RAD54LQ92698 747 aa19.64■□□□□ 0.73
USH1C-205ENST00000527020 GOLGA1Q92805 767 aa19.64■□□□□ 0.73
USH1C-205ENST00000527020 PVALEFA0A1B0GWK0 134 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 ZBTB5O15062 677 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 HLA-DOAP06340 250 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 ALDH1B1P30837 517 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 ECM1Q16610 540 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 CCDC96Q2M329 555 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 SRGAP1Q7Z6B7 1085 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 FAM114A1Q8IWE2 563 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 CUL5Q93034 780 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 TRIM10Q9UDY6 481 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 CTAGE9A4FU28 777 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 SEC31AO94979 1220 aaKnown RBP19.63■□□□□ 0.73
USH1C-205ENST00000527020 TFRCP02786 760 aaKnown RBP19.63■□□□□ 0.73
USH1C-205ENST00000527020 HERVK_113P62684 666 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 ATP2B2Q01814 1243 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 TBC1D8BQ0IIM8 1120 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 TMCO3Q6UWJ1 677 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 DYMQ7RTS9 669 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 SNX29Q8TEQ0 813 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 GJA10Q969M2 543 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 MYO1AQ9UBC5 1043 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 PRDM4Q9UKN5 801 aa19.63■□□□□ 0.73
USH1C-205ENST00000527020 ATF5Q9Y2D1 282 aaPredicted RBP19.63■□□□□ 0.73
USH1C-205ENST00000527020 MTIF2P46199 727 aaKnown RBP19.62■□□□□ 0.73
USH1C-205ENST00000527020 EHHADHQ08426 723 aa19.62■□□□□ 0.73
USH1C-205ENST00000527020 ZDHHC15Q96MV8 337 aa19.62■□□□□ 0.73
USH1C-205ENST00000527020 PARD6BQ9BYG5 372 aa19.62■□□□□ 0.73
USH1C-205ENST00000527020 DBNDD1Q9H9R9 158 aa19.62■□□□□ 0.73
USH1C-205ENST00000527020 ST7Q9NRC1 585 aa19.62■□□□□ 0.73
USH1C-205ENST00000527020 FAM196BA6NMK8 535 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 CACNB3P54284 484 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 CHMP4BP1P59074 171 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 GABPB1Q06547 395 aaPredicted RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 KIF4BQ2VIQ3 1234 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 ERGIC2Q96RQ1 377 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 NAPGQ99747 312 aaPredicted RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 NOC4LQ9BVI4 516 aaKnown RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 RAB34Q9BZG1 259 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 ZSWIM4Q9H7M6 989 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 DDX25Q9UHL0 483 aaKnown RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 PLA2G4AP47712 749 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 MRPL12P52815 198 aaKnown RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 TUBB2AQ13885 445 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 KRT79Q5XKE5 535 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 CC2D1AQ6P1N0 951 aaPredicted RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 RETREG2Q8NC44 543 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 MASTLQ96GX5 879 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 CCDC17Q96LX7 622 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 TUBB2BQ9BVA1 445 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 NUP58Q9BVL2 599 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 PSTPIP2Q9H939 334 aa19.61■□□□□ 0.73
USH1C-205ENST00000527020 PUF60Q9UHX1 559 aaKnown RBP19.61■□□□□ 0.73
USH1C-205ENST00000527020 DDTLA6NHG4 134 aaPredicted RBP19.6■□□□□ 0.73
USH1C-205ENST00000527020 PDE6BP35913 854 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 AMPD2Q01433 879 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 GLIS3Q8NEA6 775 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 FAM198AQ9UFP1 575 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 TFR2Q9UP52 801 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 MMP10P09238 476 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 TRIM21P19474 475 aaKnown RBP19.6■□□□□ 0.73
USH1C-205ENST00000527020 ZBED6P86452 979 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 SH3BP5LQ7L8J4 393 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 GUF1Q8N442 669 aaKnown RBP19.6■□□□□ 0.73
USH1C-205ENST00000527020 DDX12PQ92771 950 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 MKL1Q969V6 931 aa19.6■□□□□ 0.73
USH1C-205ENST00000527020 SLX4Q8IY92 1834 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 G3V3G9 751 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 EEF2P13639 858 aaKnown RBP19.59■□□□□ 0.73
USH1C-205ENST00000527020 TCP10Q12799 353 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 QRICH1Q2TAL8 776 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 FIGNQ5HY92 759 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 DCAF8Q5TAQ9 597 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 PODNQ7Z5L7 613 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 CEP112Q8N8E3 955 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 DNAJC19Q96DA6 116 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 SASH3O75995 380 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 TBC1D8O95759 1140 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 SIAH1Q8IUQ4 282 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 KIAA0825Q8IV33 1275 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 ANKZF1Q9H8Y5 726 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 GUCA1BQ9UMX6 200 aa19.59■□□□□ 0.73
USH1C-205ENST00000527020 A0A1W2PQJ5 194 aa19.58■□□□□ 0.72
USH1C-205ENST00000527020 USP17L15C9J2P7 530 aa19.58■□□□□ 0.72
USH1C-205ENST00000527020 USP17L13C9JLJ4 530 aa19.58■□□□□ 0.72
USH1C-205ENST00000527020 USP17L11C9JVI0 530 aa19.58■□□□□ 0.72
USH1C-205ENST00000527020 USP17L18D6R9N7 530 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms