RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 CALML4Q96GE6 196 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 PNMA5Q96PV4 448 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 MTMR9Q96QG7 549 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ZNF287Q9HBT7 754 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 MED4Q9NPJ6 270 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 LRWD1Q9UFC0 647 aa12.99□□□□□ -0.33
LINC01001-201ENST00000526704 ESYT2A0FGR8 921 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 CAPN2P17655 700 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 HNRNPH3P31942 346 aaKnown RBP12.98□□□□□ -0.33
LINC01001-201ENST00000526704 ACTN2P35609 894 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 TEX11Q8IYF3 940 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 SECISBP2LQ93073 1101 aaKnown RBP12.98□□□□□ -0.33
LINC01001-201ENST00000526704 ACBD3Q9H3P7 528 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 HPCAL4Q9UM19 191 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 USP17L5A8MUK1 530 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 VGLL3A8MV65 326 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 MCM3P25205 808 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 SMARCA1P28370 1054 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 TXKP42681 527 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 VWA3BQ502W6 1294 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 UNC13DQ70J99 1090 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 SMCR8Q8TEV9 937 aaPredicted RBP12.98□□□□□ -0.33
LINC01001-201ENST00000526704 ARHGEF1Q92888 912 aaKnown RBP12.98□□□□□ -0.33
LINC01001-201ENST00000526704 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 TSGA10Q9BZW7 698 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 VAT1LQ9HCJ6 419 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 PLAGL2Q9UPG8 496 aa12.98□□□□□ -0.33
LINC01001-201ENST00000526704 GPR75-ASB3A0A0A6YYF3 556 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 SLC37A4O43826 429 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 EDIL3O43854 480 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 PHACTR2O75167 634 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 SYF2O95926 243 aaKnown RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 MYBL2P10244 700 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 NOVP48745 357 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 FXR2P51116 673 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 KIF5AQ12840 1032 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 CALCRLQ16602 461 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 C15orf52Q6ZUT6 534 aaKnown RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 GSPT2Q8IYD1 628 aaKnown RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 IQCDQ96DY2 449 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 STK17AQ9UEE5 414 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 CAPN6Q9Y6Q1 641 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 TNNT3P45378 269 aaPredicted RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 C2orf54Q08AI8 447 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 MAP9Q49MG5 647 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 FNBP4Q8N3X1 1017 aaPredicted RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 LARP4BQ92615 738 aaKnown RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 CCDC42Q96M95 316 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 NDST4Q9H3R1 872 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 RIOX1Q9H6W3 641 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 RTCBQ9Y3I0 505 aaKnown RBP12.97□□□□□ -0.33
LINC01001-201ENST00000526704 LTBP1Q14766 1721 aa12.97□□□□□ -0.33
LINC01001-201ENST00000526704 ABCB11O95342 1321 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 GREB1LQ9C091 1923 aaPredicted RBP12.96□□□□□ -0.33
LINC01001-201ENST00000526704 ZMYND10O75800 440 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
LINC01001-201ENST00000526704 LCA5LO95447 670 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 TDP2O95551 362 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 KIF11P52732 1056 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 RHBDL3P58872 404 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 MAN2A1Q16706 1144 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 C2CD5Q86YS7 1000 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 CERS3Q8IU89 383 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 IFIH1Q9BYX4 1025 aaKnown RBP12.96□□□□□ -0.33
LINC01001-201ENST00000526704 FAM204AQ9H8W3 233 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 JADE2Q9NQC1 790 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 FAM207AQ9NSI2 230 aaPredicted RBP12.96□□□□□ -0.33
LINC01001-201ENST00000526704 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 PLIN4Q96Q06 1357 aa12.96□□□□□ -0.33
LINC01001-201ENST00000526704 FRMPD2Q68DX3 1309 aaPredicted RBP12.96□□□□□ -0.33
LINC01001-201ENST00000526704 PVALEFA0A1B0GWK0 134 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 POTEMA6NI47 508 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 RNF40O75150 1001 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 GPSM2P81274 684 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 SPA17Q15506 151 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 DYMQ7RTS9 669 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.34
LINC01001-201ENST00000526704 COG1Q8WTW3 980 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 PCDHA13Q9Y5I0 950 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 ADAMTSL1Q8N6G6 1762 aa12.96□□□□□ -0.34
LINC01001-201ENST00000526704 hCG_1984214I3L0E3 225 aa12.95□□□□□ -0.34
LINC01001-201ENST00000526704 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
LINC01001-201ENST00000526704 PDHBP11177 359 aa12.95□□□□□ -0.34
LINC01001-201ENST00000526704 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
LINC01001-201ENST00000526704 ZNF572Q7Z3I7 529 aaPredicted RBP12.95□□□□□ -0.34
LINC01001-201ENST00000526704 CREG2Q8IUH2 290 aa12.95□□□□□ -0.34
LINC01001-201ENST00000526704 ZNF713Q8N859 430 aaPredicted RBP12.95□□□□□ -0.34
LINC01001-201ENST00000526704 TRIM58Q8NG06 486 aa12.95□□□□□ -0.34
LINC01001-201ENST00000526704 RAD54LQ92698 747 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms