RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 STX6O43752 255 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 PDCP20941 246 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 RGS2P41220 211 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 FLT3LGP49771 235 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 GHRHRQ02643 423 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 GNL2Q13823 731 aaKnown RBP15.7■□□□□ 0.1
CD44-224ENST00000526669 ZNF792Q3KQV3 632 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 EARS2Q5JPH6 523 aaKnown RBP15.7■□□□□ 0.1
CD44-224ENST00000526669 OTOP1Q7RTM1 612 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 FERMT3Q86UX7 667 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 SOCS4Q8WXH5 440 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 USP6NLQ92738 828 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 ZFP91Q96JP5 570 aaPredicted RBP15.7■□□□□ 0.1
CD44-224ENST00000526669 IPO9Q96P70 1041 aaKnown RBP15.7■□□□□ 0.1
CD44-224ENST00000526669 GLT8D2Q9H1C3 349 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 SRRDQ9UH36 339 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 M0R2N6 131 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 ALDH5A1P51649 535 aaPredicted RBP15.69■□□□□ 0.1
CD44-224ENST00000526669 PKP1Q13835 747 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 CCL14Q16627 93 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 ARHGEF16Q5VV41 709 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 PIK3AP1Q6ZUJ8 805 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 FAM177A1Q8N128 213 aaPredicted RBP15.69■□□□□ 0.1
CD44-224ENST00000526669 IL31RAQ8NI17 732 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 RMDN3Q96TC7 470 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 PXMP2Q9NR77 195 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 MTMR6Q9Y217 621 aa15.69■□□□□ 0.1
CD44-224ENST00000526669 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 MYCLP12524 364 aaPredicted RBP15.68■□□□□ 0.1
CD44-224ENST00000526669 HOXD10P28358 340 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 AP3B2Q13367 1082 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 SAMD3Q8N6K7 520 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 TNFRSF25Q93038 417 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 MAML3Q96JK9 1138 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 APBA2Q99767 749 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 MAP3K20Q9NYL2 800 aaKnown RBP15.68■□□□□ 0.1
CD44-224ENST00000526669 FLRT1Q9NZU1 646 aa15.68■□□□□ 0.1
CD44-224ENST00000526669 MYH9P35579 1960 aaKnown RBP15.67■□□□□ 0.1
CD44-224ENST00000526669 ARHGEF6Q15052 776 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 PGM5Q15124 567 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 INF2Q27J81 1249 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 KRT25Q7Z3Z0 450 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 RAET1EQ8TD07 263 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 SLC5A4Q9NY91 659 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 ADD3Q9UEY8 706 aaKnown RBP15.67■□□□□ 0.1
CD44-224ENST00000526669 PTCH2Q9Y6C5 1203 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
CD44-224ENST00000526669 FOSP01100 380 aaPredicted RBP15.66■□□□□ 0.1
CD44-224ENST00000526669 ELNP15502 786 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 ATP2B1P20020 1258 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 NONOQ15233 471 aaKnown RBP eCLIP15.66■□□□□ 0.1
CD44-224ENST00000526669 EEPD1Q7L9B9 569 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 DNERQ8NFT8 737 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
CD44-224ENST00000526669 TBCKQ8TEA7 893 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 PDCD2LQ9BRP1 358 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 MAF1Q9H063 256 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 FOXP1Q9H334 677 aaPredicted RBP15.66■□□□□ 0.1
CD44-224ENST00000526669 FRMPD4Q14CM0 1322 aa15.66■□□□□ 0.1
CD44-224ENST00000526669 GNRH1P01148 92 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 NR3C2P08235 984 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 HOXC6P09630 235 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 ARHGAP4P98171 946 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 PDE4DQ08499 809 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 RESTQ13127 1097 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 ARMCX2Q7L311 632 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 NOSTRINQ8IVI9 506 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 TRIB2Q92519 343 aa15.65■□□□□ 0.1
CD44-224ENST00000526669 ASB14A6NK59 587 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 WNT7AO00755 349 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 ADCY3O60266 1144 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 ZSCAN22P10073 491 aaPredicted RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 U2AF2P26368 475 aaKnown RBP eCLIP15.64■□□□□ 0.09
CD44-224ENST00000526669 CCND2P30279 289 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 CYP2C19P33261 490 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 SREBF1P36956 1147 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 TRIM32Q13049 653 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 FOXD4L6Q3SYB3 417 aaPredicted RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 FOXD4L3Q6VB84 417 aaPredicted RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 CTU1Q7Z7A3 348 aaKnown RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 FBXO16Q8IX29 292 aaPredicted RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 TINF2Q9BSI4 451 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 RTEL1Q9NZ71 1219 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 DIS3Q9Y2L1 958 aaKnown RBP15.64■□□□□ 0.09
CD44-224ENST00000526669 ZDHHC9Q9Y397 364 aa15.64■□□□□ 0.09
CD44-224ENST00000526669 EDIL3O43854 480 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 F13A1P00488 732 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 DDIT3P35638 169 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 ZNF76P36508 570 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 MRPS9P82933 396 aaKnown RBP15.63■□□□□ 0.09
CD44-224ENST00000526669 NBR1Q14596 966 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 LETM2Q2VYF4 491 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 PRAMEF19Q5SWL8 479 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 MCTP2Q6DN12 878 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 ZNF467Q7Z7K2 595 aaPredicted RBP15.63■□□□□ 0.09
CD44-224ENST00000526669 UIMC1Q96RL1 719 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms