RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 UNC5AQ6ZN44 842 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 RUFY4Q6ZNE9 571 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 FAM26EQ8N5C1 309 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 TAB3Q8N5C8 712 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 TXNDC5Q8NBS9 432 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 USP33Q8TEY7 942 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 KISS1RQ969F8 398 aaPredicted RBP5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 DIS3Q9Y2L1 958 aaKnown RBP5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 TSC22D4Q9Y3Q8 395 aa5.09□□□□□ -1.59
ECHDC1-219ENST00000526299 A0A087WZG4 1122 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 DDX3XO00571 662 aaKnown RBP eCLIP5.08□□□□□ -1.67e-10■■■□□ 16
ECHDC1-219ENST00000526299 NTRK1P04629 796 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 DPY19L1Q2PZI1 675 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 BORAQ6PGQ7 559 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 FAM124AQ86V42 546 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 KYQ8NBH2 561 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 TM9SF2Q99805 663 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 ZNF747Q9BV97 191 aa5.08□□□□□ -1.6
ECHDC1-219ENST00000526299 TCEAL1Q15170 157 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 CRB2Q5IJ48 1285 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 ETV3LQ6ZN32 361 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 KIAA0825Q8IV33 1275 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 FERD3LQ96RJ6 166 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 SPON2Q9BUD6 331 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 VPS11Q9H270 941 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 SLITRK6Q9H5Y7 841 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 PPP4R1LQ9P1A2 415 aa5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 ZNF214Q9UL59 606 aaPredicted RBP5.07□□□□□ -1.6
ECHDC1-219ENST00000526299 C2orf71A6NGG8 1288 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 LAMTOR5O43504 91 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 B4GALT3O60512 393 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 AMHP03971 560 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 FUCA1P04066 466 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 IMPDH2P12268 514 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 GUCY2CP25092 1073 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 SEPHS1P49903 392 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 PRR31Q5SQ13 230 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 FBXW10Q5XX13 1052 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 CD300LDQ6UXZ3 194 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 PALM2Q8IXS6 379 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 KLC2Q9H0B6 622 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 BACE2Q9Y5Z0 518 aa5.06□□□□□ -1.6
ECHDC1-219ENST00000526299 LTBP3Q9NS15 1303 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 C7orf72A4D263 438 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 FZD7O75084 574 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 PAMP19021 973 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 ERCC3P19447 782 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 ITGA1P56199 1179 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 TTLL6Q8N841 843 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 RNF34Q969K3 372 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 LCORQ96JN0 433 aaPredicted RBP5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 HAUS7Q99871 368 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 PCED1AQ9H1Q7 454 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 CD248Q9HCU0 757 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 WHRNQ9P202 907 aa5.05□□□□□ -1.6
ECHDC1-219ENST00000526299 NPHP3-ACAD11A0A0J9YXS1 232 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 GPR42O15529 346 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 SGSM2O43147 1006 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 MIB1Q86YT6 1006 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 PLEKHO2Q8TD55 490 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 FGD4Q96M96 766 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 KLHL25Q9H0H3 589 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 PCDH18Q9HCL0 1135 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 PPT2Q9UMR5 302 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 HS3ST3A1Q9Y663 406 aa5.04□□□□□ -1.6
ECHDC1-219ENST00000526299 NPEPPSL1A6NEC2 478 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 NPHS1O60500 1241 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 AMPD2Q01433 879 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 KLF10Q13118 480 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 ZNF326Q5BKZ1 582 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 USP51Q70EK9 711 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 DCP2Q8IU60 420 aaKnown RBP5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 MARCH2Q9P0N8 246 aa5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 CGGBP1Q9UFW8 167 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 ING1Q9UK53 422 aaPredicted RBP5.03□□□□□ -1.6
ECHDC1-219ENST00000526299 PDIA4P13667 645 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 STAT5AP42229 794 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 MRPL58Q14197 206 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 SURF1Q15526 300 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 GNPTABQ3T906 1256 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 MBLAC2Q68D91 279 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 HEATR6Q6AI08 1181 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 ADAT2Q7Z6V5 191 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 TMEM87AQ8NBN3 555 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 RBBP8NLQ8NC74 664 aaPredicted RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 DNERQ8NFT8 737 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 DPF3Q92784 378 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 CDK5RAP1Q96SZ6 601 aaKnown RBP5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 BCL2L13Q9BXK5 485 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 AP5M1Q9H0R1 490 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 DEF6Q9H4E7 631 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 CLEC1BQ9P126 229 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 PCDHB10Q9UN67 800 aa5.02□□□□□ -1.61
ECHDC1-219ENST00000526299 C9orf118A6NHY6 69 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 EPHX1P07099 455 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 ZNF28P17035 718 aa5.01□□□□□ -1.61
ECHDC1-219ENST00000526299 ADAM9Q13443 819 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms