RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 SEZ6LQ9BYH1 1024 aa16.83■□□□□ 0.28
CPSF1-201ENST00000526271 CERS4Q9HA82 394 aa16.83■□□□□ 0.28
CPSF1-201ENST00000526271 HELLSQ9NRZ9 838 aa16.83■□□□□ 0.28
CPSF1-201ENST00000526271 MTCH2Q9Y6C9 303 aa16.83■□□□□ 0.28
CPSF1-201ENST00000526271 ZMYM6O95789 1325 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 LOC102724159A0A0B4J2E5 919 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 LPXNO60711 386 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 IQCF3P0C7M6 154 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 GOLGA8HP0CJ92 632 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 POU3F3P20264 500 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 MRPS5P82675 430 aaKnown RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 TAP1Q03518 808 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 PWP2Q15269 919 aaKnown RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 RNF207Q6ZRF8 634 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 TMCO2Q7Z6W1 182 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 MTG1Q9BT17 334 aaPredicted RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 POLR3EQ9NVU0 708 aa16.82■□□□□ 0.28
CPSF1-201ENST00000526271 ADD3Q9UEY8 706 aaKnown RBP16.82■□□□□ 0.28
CPSF1-201ENST00000526271 WDR19Q8NEZ3 1342 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 PPP4R3BQ5MIZ7 849 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 RPUSD2Q8IZ73 545 aaKnown RBP16.81■□□□□ 0.28
CPSF1-201ENST00000526271 CRBNQ96SW2 442 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 UHRF1Q96T88 793 aaPredicted RBP16.81■□□□□ 0.28
CPSF1-201ENST00000526271 ZKSCAN3Q9BRR0 538 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
CPSF1-201ENST00000526271 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 ARHGAP1Q07960 439 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 HIC1Q14526 733 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 NFRKBQ6P4R8 1299 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 TRAF7Q6Q0C0 670 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 MICALL1Q8N3F8 863 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 WNT8BQ93098 351 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 TAAR1Q96RJ0 339 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
CPSF1-201ENST00000526271 TOMM22Q9NS69 142 aa16.8■□□□□ 0.28
CPSF1-201ENST00000526271 OPLAHO14841 1288 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 CPT1AP50416 773 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 PPP2R5BQ15173 497 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 FAM47CQ5HY64 1035 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 GDF6Q6KF10 455 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-201ENST00000526271 SYTL5Q8TDW5 730 aaPredicted RBP16.79■□□□□ 0.28
CPSF1-201ENST00000526271 AFG1LQ8WV93 481 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 IL25Q9H293 177 aa16.79■□□□□ 0.28
CPSF1-201ENST00000526271 CCDC171Q6TFL3 1326 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 PFKMP08237 780 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 TXNP10599 105 aaKnown RBP16.78■□□□□ 0.28
CPSF1-201ENST00000526271 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
CPSF1-201ENST00000526271 PDE4DQ08499 809 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 LY6KQ17RY6 165 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 SLC35G1Q2M3R5 365 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 USH1GQ495M9 461 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 TMEM67Q5HYA8 995 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 HERC6Q8IVU3 1022 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 DNERQ8NFT8 737 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
CPSF1-201ENST00000526271 KHSRPQ92945 711 aaKnown RBP eCLIP16.78■□□□□ 0.28
CPSF1-201ENST00000526271 BAZ2BQ9UIF8 2168 aaKnown RBP16.78■□□□□ 0.28
CPSF1-201ENST00000526271 NBNO60934 754 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 MMP3P08254 477 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 SUPT20HL2P0C7V6 817 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 DEFB103AP81534 67 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 MBTPS1Q14703 1052 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 TTC14Q96N46 770 aa16.77■□□□□ 0.28
CPSF1-201ENST00000526271 SIP14410 1827 aa16.77■□□□□ 0.27
CPSF1-201ENST00000526271 DOCK5Q9H7D0 1870 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 NKRFO15226 690 aaKnown RBP eCLIP16.76■□□□□ 0.27
CPSF1-201ENST00000526271 GRB10Q13322 594 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 MKRN4PQ13434 485 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-201ENST00000526271 HDAC1Q13547 482 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-201ENST00000526271 CDC37Q16543 378 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-201ENST00000526271 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
CPSF1-201ENST00000526271 RGS22Q8NE09 1264 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 SLC9A7Q96T83 725 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 OSBPL7Q9BZF2 842 aa16.76■□□□□ 0.27
CPSF1-201ENST00000526271 MICAL3Q7RTP6 2002 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 ATG2AQ2TAZ0 1938 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 TLL1O43897 1013 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 PPP1R11O60927 126 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-201ENST00000526271 RGS20O76081 388 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 RFC2P35250 354 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 WDR5P61964 334 aaKnown RBP16.75■□□□□ 0.27
CPSF1-201ENST00000526271 PTPN11Q06124 597 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-201ENST00000526271 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 SESTD1Q86VW0 696 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 ADGRF4Q8IZF3 695 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 PHOSPHO2Q8TCD6 241 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 ARNTL2Q8WYA1 636 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 LNPKQ9C0E8 428 aa16.75■□□□□ 0.27
CPSF1-201ENST00000526271 SDSP20132 328 aa16.74■□□□□ 0.27
CPSF1-201ENST00000526271 ZNF200P98182 395 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-201ENST00000526271 RBL2Q08999 1139 aa16.74■□□□□ 0.27
CPSF1-201ENST00000526271 PTGISQ16647 500 aa16.74■□□□□ 0.27
CPSF1-201ENST00000526271 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
CPSF1-201ENST00000526271 ENAHQ8N8S7 591 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms