RNA–Protein interactions for RNA: ENST00000525592.1

TM9SF1-204, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-204ENST00000525592 RMDN3Q96TC7 470 aa23.26■■□□□ 1.31
TM9SF1-204ENST00000525592 COL20A1Q9P218 1284 aa23.26■■□□□ 1.31
TM9SF1-204ENST00000525592 PPP1R11O60927 126 aaPredicted RBP23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 PTGS1P23219 599 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 ITGB8P26012 769 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 KIF5BP33176 963 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 HSD17B4P51659 736 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 TTLL4Q14679 1199 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 SLC35G1Q2M3R5 365 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 BRDTQ58F21 947 aaPredicted RBP23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 RNF20Q5VTR2 975 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 FAM126BQ8IXS8 530 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 OR6J1Q8NGC5 347 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 CCDC136Q96JN2 1154 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 TAAR1Q96RJ0 339 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 POLR3EQ9NVU0 708 aa23.25■■□□□ 1.31
TM9SF1-204ENST00000525592 OPLAHO14841 1288 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 CYTH3O43739 400 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 CDC45O75419 566 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 CFBP00751 764 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 ITGA7Q13683 1181 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 HOMER1Q86YM7 354 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 ZNF654Q8IZM8 581 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 CTCFLQ8NI51 663 aaPredicted RBP23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 PIGSQ96S52 555 aa23.24■■□□□ 1.31
TM9SF1-204ENST00000525592 PNMA6FA0A0J9YX94 578 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 SH2B2O14492 632 aaPredicted RBP23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 TIMP1P01033 207 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 LIFRP42702 1097 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 FPGSQ05932 587 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 STXBP2Q15833 593 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 ARHGEF16Q5VV41 709 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 KIAA1217Q5T5P2 1943 aa23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 BAZ2BQ9UIF8 2168 aaKnown RBP23.23■■□□□ 1.31
TM9SF1-204ENST00000525592 CD4P01730 458 aa23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 TXNP10599 105 aaKnown RBP23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 SMARCA1P28370 1054 aa23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 LZTS2Q9BRK4 669 aa23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 SPZ1Q9BXG8 430 aa23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 PXMP2Q9NR77 195 aa23.22■■□□□ 1.31
TM9SF1-204ENST00000525592 CCDC69A6NI79 296 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 A6NJR5 290 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 KPNA6O60684 536 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 GNAQP50148 359 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 PURAQ00577 322 aaKnown RBP23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 SHHQ15465 462 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 CCDC62Q6P9F0 684 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 NFXL1Q6ZNB6 911 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 GRIN2DO15399 1336 aa23.21■■□□□ 1.31
TM9SF1-204ENST00000525592 EIF3JO75822 258 aaKnown RBP23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 CALM1P0DP23 149 aa23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 CALM2P0DP24 149 aa23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 CALM3P0DP25 149 aa23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 EIF2AK2P19525 551 aaKnown RBP23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 C9orf50Q5SZB4 431 aa23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 MFSD5Q6N075 450 aa23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 MTG1Q9BT17 334 aaPredicted RBP23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 GPHNQ9NQX3 736 aaPredicted RBP23.2■■□□□ 1.3
TM9SF1-204ENST00000525592 GCOM1H8Y6P7 765 aaPredicted RBP23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 ARIH2O95376 493 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 NR3C2P08235 984 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 POLR2MP0CAP2 368 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 SEPT14Q6ZU15 432 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 MYL10Q9BUA6 226 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 SCN10AQ9Y5Y9 1956 aa23.19■■□□□ 1.3
TM9SF1-204ENST00000525592 MYL3P08590 195 aa23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 PSMC6P62333 389 aa23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 SGMS1Q86VZ5 419 aa23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 COPS5Q92905 334 aa23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 RRP36Q96EU6 259 aaKnown RBP23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 PDCD2LQ9BRP1 358 aa23.18■■□□□ 1.3
TM9SF1-204ENST00000525592 GH1P01241 217 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 HOXA13P31271 388 aaPredicted RBP23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 EPHB4P54760 987 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 PPIGQ13427 754 aaKnown RBP eCLIP23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 TSGA10IPQ3SY00 556 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 TMEM199Q8N511 208 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 DEFB123Q8N688 67 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 SEC63Q9UGP8 760 aaKnown RBP23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 SLC12A7Q9Y666 1083 aa23.17■■□□□ 1.3
TM9SF1-204ENST00000525592 B4GALT4O60513 344 aa23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 ARHGAP1Q07960 439 aa23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 COL9A3Q14050 684 aaPredicted RBP23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 KRT32Q14532 448 aa23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 FAM109BQ6ICB4 259 aaPredicted RBP23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 EMID1Q96A84 441 aaPredicted RBP23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 RNPC3Q96LT9 517 aaKnown RBP23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 NEK1Q96PY6 1258 aa23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 ALDH8A1Q9H2A2 487 aaPredicted RBP23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 MRVI1Q9Y6F6 885 aa23.16■■□□□ 1.3
TM9SF1-204ENST00000525592 NEFLP07196 543 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 SUPT20HL2P0C7V6 817 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 PGM5Q15124 567 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 LY6KQ17RY6 165 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 NFRKBQ6P4R8 1299 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 KCNV1Q6PIU1 500 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 VSIG10LQ86VR7 867 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 PPP1R12CQ9BZL4 782 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 TRPV6Q9H1D0 765 aa23.15■■□□□ 1.3
TM9SF1-204ENST00000525592 HIPK3Q9H422 1215 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms